FFCP PHASE1:Hg19::chr8:98900091..98900108,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4147 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6908 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENST00000520160_5end | |||
|description=CAGE_peak_4_at_MATN2_5end | |||
|id=chr8:98900091..98900108,+ | |||
|ontology_enrichment_celltype=CL:0000077!2.32e-24!19;CL:0000192!1.53e-15!42;CL:0000514!1.53e-15!42;CL:0000222!1.37e-13!119;CL:0000359!1.14e-12!32;CL:0000187!6.99e-12!54;CL:0000680!6.26e-11!57;CL:0000056!6.26e-11!57;CL:0000355!6.26e-11!57;CL:0000183!2.37e-10!59;CL:0000393!4.45e-10!60;CL:0000211!4.45e-10!60;CL:0000055!2.00e-09!180;CL:1000306!8.56e-09!4;CL:0002547!8.56e-09!4;CL:0002594!4.32e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000077;9.62e-22;19!CL:1000306;9.21e-16;4!CL:0002547;9.21e-16;4!CL:0002097;4.03e-14;2!CL:0002577;5.99e-10;3!CL:0000174;1.02e-09;3!CL:0002568;2.90e-08;1!CL:0002594;1.14e-07;4!CL:0000306;1.69e-07;4!CL:0002222;1.69e-07;4!CL:0002224;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.86e-22,19;CL:1000306,1.69e-15,4;CL:0002547,1.69e-15,4;CL:0002097,1.47e-14,2;CL:0002577,4.79e-10,3;CL:0000174,5.24e-10,3;CL:0002568,3.34e-08,1;CL:0002594,1.44e-07,4;CL:0000306,1.87e-07,4;CL:0002222,1.87e-07,4;CL:0002224,1.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.90e-08;1 | |||
|ontology_enrichment_disease=DOID:2394!5.89e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.91e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.26e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.06e-11!42;UBERON:0003509!2.06e-11!42;UBERON:0004572!2.06e-11!42;UBERON:0004872!8.41e-11!84;UBERON:0002049!9.91e-11!79;UBERON:0007798!9.91e-11!79;UBERON:0001981!2.26e-10!60;UBERON:0007500!2.26e-10!60;UBERON:0004537!2.26e-10!60;UBERON:0006965!2.26e-10!60;UBERON:0002385!2.71e-10!63;UBERON:0001015!2.71e-10!63;UBERON:0000383!2.71e-10!63;UBERON:0001134!8.17e-10!61;UBERON:0002036!8.17e-10!61;UBERON:0003082!8.17e-10!61;UBERON:0000415!8.56e-09!4;UBERON:0007240!8.56e-09!4;UBERON:0005742!8.56e-09!4;UBERON:0005734!8.56e-09!4;UBERON:0004664!8.56e-09!4;UBERON:0004663!8.56e-09!4;UBERON:0004535!2.10e-08!110;UBERON:0000055!3.07e-08!69;UBERON:0004573!4.15e-08!33;UBERON:0004571!4.15e-08!33;UBERON:0001310!4.32e-08!4;UBERON:0001009!5.67e-08!113;UBERON:0004290!8.38e-08!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;9.21e-16;4!UBERON:0000415;9.21e-16;4!UBERON:0007240;9.21e-16;4!UBERON:0005742;9.21e-16;4!UBERON:0005734;9.21e-16;4!UBERON:0004664;9.21e-16;4!UBERON:0004663;9.21e-16;4!UBERON:0002369;1.02e-09;3!UBERON:0001235;1.02e-09;3!UBERON:0006858;1.02e-09;3!UBERON:0001987;1.14e-07;4!UBERON:0001310;1.14e-07;4!UBERON:0010077;1.69e-07;4!UBERON:0005389;1.69e-07;4!UBERON:0000484;1.69e-07;4!UBERON:0000965;1.69e-07;4!UBERON:0001803;1.69e-07;4!UBERON:0010260;3.21e-07;9!UBERON:0000478;6.17e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.69e-15,4;UBERON:0007240,1.69e-15,4;UBERON:0005742,1.69e-15,4;UBERON:0005734,1.69e-15,4;UBERON:0004664,1.69e-15,4;UBERON:0004663,1.69e-15,4;UBERON:0002369,5.24e-10,3;UBERON:0001235,5.24e-10,3;UBERON:0006858,5.24e-10,3;UBERON:0004797,4.42e-09,7;UBERON:0001987,9.64e-08,4;UBERON:0004340,9.64e-08,4;UBERON:0001310,1.44e-07,4;UBERON:0010077,1.87e-07,4;UBERON:0005389,1.87e-07,4;UBERON:0000484,1.87e-07,4;UBERON:0002546,1.87e-07,4;UBERON:0000965,1.87e-07,4;UBERON:0001803,1.87e-07,4;UBERON:0003073,1.87e-07,4;UBERON:0005426,1.87e-07,4;UBERON:0010260,3.73e-07,9;UBERON:0000478,5.87e-07,24 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01304409331664,6.3556406790345,1.14734648299525,0.709336764396714,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,2.06834745212444,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,7.83742380354924,5.22920075160176,3.99891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,2.11673205330776,0.248107807818777,0.767309866440312,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.762520775695299,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0.243713489631284,1.05650146756755,0.545999645631943,0,0,0.551365343546124,0,0.876901770507525,0,0,1.01455188481352,0.30982349809975,0.281695602532241,0.286822704408103,1.27723753317057,2.1400263088875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,2.07875276582847,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.627617077873999,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0.318593534327405,0,0.155262956876259,0,0.797525143673985,1.04349012362347,1.95334891696384,8.75851987988229,0.406870733204662,0,1.50374779859484,0,1.59238355479446,0,0,0,0,1.73357847366573,1.92997432237433,0,0.680117776536817,1.389134845943,0.97894681802587,0.895444205407437,0.617602894321944,1.31570429747224,3.00371548107998,0.964570191354574,0.675769762612291,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0,0,0,2.34640942403454,0.244482888365733,0,0,0,0 | |||
|short_description=p4@MATN2 | |||
}} |
Revision as of 23:01, 22 January 2014
Short description: | p4@MATN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MATN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000520160_5end |
EntrezGene: | MATN2 |
HGNC: | 6908 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.86e-22 | 19 |
fibroblast of tunica adventitia of artery | 1.69e-15 | 4 |
fibroblast of the aortic adventitia | 1.69e-15 | 4 |
cortical cell of adrenal gland | 1.47e-14 | 2 |
placental epithelial cell | 4.79e-10 | 3 |
steroid hormone secreting cell | 5.24e-10 | 3 |
mesenchymal stem cell of Wharton's jelly | 3.34e-08 | 1 |
smooth muscle cell of the umbilical artery | 1.44e-07 | 4 |
crystallin accumulating cell | 1.87e-07 | 4 |
vertebrate lens cell | 1.87e-07 | 4 |
lens epithelial cell | 1.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.69e-15 | 4 |
tunica adventitia of artery | 1.69e-15 | 4 |
adventitia | 1.69e-15 | 4 |
tunica adventitia of blood vessel | 1.69e-15 | 4 |
aorta tunica adventitia | 1.69e-15 | 4 |
aorta wall | 1.69e-15 | 4 |
adrenal gland | 5.24e-10 | 3 |
adrenal cortex | 5.24e-10 | 3 |
adrenal/interrenal gland | 5.24e-10 | 3 |
blood vessel layer | 4.42e-09 | 7 |
placenta | 9.64e-08 | 4 |
allantois | 9.64e-08 | 4 |
umbilical artery | 1.44e-07 | 4 |
cuboidal epithelium | 1.87e-07 | 4 |
transparent eye structure | 1.87e-07 | 4 |
simple cuboidal epithelium | 1.87e-07 | 4 |
cranial placode | 1.87e-07 | 4 |
lens of camera-type eye | 1.87e-07 | 4 |
epithelium of lens | 1.87e-07 | 4 |
lens placode | 1.87e-07 | 4 |
lens vesicle | 1.87e-07 | 4 |
umbilical blood vessel | 3.73e-07 | 9 |
extraembryonic structure | 5.87e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.26e-12 | 14 |