FFCP PHASE1:Hg19::chr8:134696317..134696338,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4730 | |||
|description=CAGE_peak_at_chr8:134696317..134696338,- | |||
|id=chr8:134696317..134696338,- | |||
|ontology_enrichment_celltype=CL:0000349!1.47e-18!3;CL:0002577!1.47e-18!3;CL:0002536!3.70e-13!2;CL:0000080!1.15e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002536;5.25e-26;2!CL:0002577;4.84e-18;3!CL:0000349;1.71e-16;19!CL:0000084;3.36e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,4.63e-26,2;CL:0002577,5.05e-18,3;CL:0000349,1.73e-16,19;CL:0000084,3.17e-08,25;CL:0000827,3.17e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.04e-13;1 | |||
|ontology_enrichment_disease=DOID:1287!2.33e-13!4;DOID:114!3.62e-12!2;DOID:0060058!8.96e-10!10;DOID:0060060!2.23e-07!1;DOID:0060061!2.23e-07!1;DOID:8691!2.23e-07!1;DOID:2355!3.60e-07!1;DOID:178!7.73e-07!1;DOID:326!7.73e-07!1;DOID:3978!7.73e-07!1;DOID:3394!7.73e-07!1;DOID:5844!7.73e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.18e-20;10!DOID:0060060;7.55e-14;1!DOID:0060061;7.55e-14;1!DOID:8691;7.55e-14;1!DOID:2355;1.61e-13;1!DOID:74;2.12e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.18e-20,10;DOID:0060060,7.55e-14,1;DOID:0060061,7.55e-14,1;DOID:8691,7.55e-14,1;DOID:2355,2.07e-13,1;DOID:74,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000478!8.12e-28!24;UBERON:0001987!1.44e-23!4;UBERON:0004340!1.44e-23!4;UBERON:0002331!7.57e-15!10;UBERON:0000358!7.57e-15!10;UBERON:0000307!7.57e-15!10;UBERON:0000091!7.57e-15!10;UBERON:0000087!7.57e-15!10;UBERON:0007806!7.57e-15!10;UBERON:0008780!7.57e-15!10;UBERON:0005728!7.57e-15!10;UBERON:0005631!1.12e-14!14;UBERON:0000158!1.12e-14!14;UBERON:0003124!1.50e-13!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.08e-41;24!UBERON:0002331;5.53e-31;10!UBERON:0001987;8.87e-14;4!UBERON:0000178;3.92e-08;15!UBERON:0000179;3.92e-08;15!UBERON:0000463;3.92e-08;15!UBERON:0000305;4.12e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.49e-41,24;UBERON:0002331,6.47e-31,10;UBERON:0000358,6.47e-31,10;UBERON:0000307,6.47e-31,10;UBERON:0000091,6.47e-31,10;UBERON:0000087,6.47e-31,10;UBERON:0007010,6.47e-31,10;UBERON:0007806,6.47e-31,10;UBERON:0008780,6.47e-31,10;UBERON:0005728,6.47e-31,10;UBERON:0005631,9.24e-15,14;UBERON:0000158,9.24e-15,14;UBERON:0001987,9.15e-14,4;UBERON:0004340,9.15e-14,4;UBERON:0003124,2.99e-08,7;UBERON:0000305,3.98e-08,7;UBERON:0000178,4.02e-08,15;UBERON:0000179,4.02e-08,15;UBERON:0000463,4.02e-08,15;UBERON:0004871,3.24e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,6.77168253603534,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,14.9791895559447,6.04780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2617627290199,0,0,0,0,0,0,0,1.97764649072111,0,0,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26173241548684,4.94255755786011,5.63878527329459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.509991088181609,0,0,0,0,0,1.31443677139657,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0,3.54338933453096,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39978572953381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr8:134696317..134696338,- | |||
}} |
Revision as of 00:04, 23 January 2014
Short description: | p@chr8:134696317..134696338, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:134696317..134696338, - |
Coexpression cluster: | C4730_Placental_adult_Amniotic_cord_mycosis_hepatoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 4.63e-26 | 2 |
placental epithelial cell | 5.05e-18 | 3 |
extraembryonic cell | 1.73e-16 | 19 |
T cell | 3.17e-08 | 25 |
pro-T cell | 3.17e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.49e-41 | 24 |
umbilical cord | 6.47e-31 | 10 |
blastocyst | 6.47e-31 | 10 |
blastula | 6.47e-31 | 10 |
bilaminar disc | 6.47e-31 | 10 |
inner cell mass | 6.47e-31 | 10 |
cleaving embryo | 6.47e-31 | 10 |
connecting stalk | 6.47e-31 | 10 |
inner cell mass derived epiblast | 6.47e-31 | 10 |
extraembryonic mesoderm | 6.47e-31 | 10 |
extraembryonic membrane | 9.24e-15 | 14 |
membranous layer | 9.24e-15 | 14 |
placenta | 9.15e-14 | 4 |
allantois | 9.15e-14 | 4 |
chorion | 2.99e-08 | 7 |
amnion | 3.98e-08 | 7 |
blood | 4.02e-08 | 15 |
haemolymphatic fluid | 4.02e-08 | 15 |
organism substance | 4.02e-08 | 15 |
somatic layer of lateral plate mesoderm | 3.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.18e-20 | 10 |
non-Hodgkin lymphoma | 7.55e-14 | 1 |
cutaneous T cell lymphoma | 7.55e-14 | 1 |
mycosis fungoides | 7.55e-14 | 1 |
anemia | 2.07e-13 | 1 |
hematopoietic system disease | 2.40e-07 | 2 |