FFCP PHASE1:Hg19::chr9:4490654..4490665,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6505 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10939 | |||
|TSSclassifier=weak | |||
|UniProt=P43005 | |||
|association_with_transcript=210bp_to_ENST00000262352,uc003zij.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_SLC1A1_5end | |||
|id=chr9:4490654..4490665,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.50e-14;82!UBERON:0010122;1.38e-09;2!UBERON:0006238;6.16e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.17e-28!57;UBERON:0005068!5.17e-28!57;UBERON:0006241!5.17e-28!57;UBERON:0007135!5.17e-28!57;UBERON:0001017!4.38e-25!82;UBERON:0002616!1.00e-24!59;UBERON:0000955!1.29e-24!69;UBERON:0006238!1.29e-24!69;UBERON:0001893!1.36e-23!34;UBERON:0005743!2.07e-23!86;UBERON:0002020!3.06e-23!34;UBERON:0003528!3.06e-23!34;UBERON:0001869!5.16e-23!32;UBERON:0001950!2.40e-22!20;UBERON:0002791!6.11e-22!33;UBERON:0003075!1.13e-21!86;UBERON:0007284!1.13e-21!86;UBERON:0007023!1.65e-21!115;UBERON:0002346!1.66e-21!90;UBERON:0002780!1.56e-20!41;UBERON:0001890!1.56e-20!41;UBERON:0006240!1.56e-20!41;UBERON:0000073!3.66e-20!94;UBERON:0001016!3.66e-20!94;UBERON:0002619!5.60e-20!22;UBERON:0003080!6.90e-20!42;UBERON:0000956!4.07e-17!25;UBERON:0000203!4.07e-17!25;UBERON:0003056!2.67e-15!61;UBERON:0000033!5.43e-14!123;UBERON:0000153!7.47e-13!129;UBERON:0007811!7.47e-13!129;UBERON:0000200!2.20e-12!6;UBERON:0000025!1.85e-10!194;UBERON:0004111!6.05e-10!241;UBERON:0000477!6.38e-10!286;UBERON:0004733!2.05e-09!12;UBERON:0002028!2.05e-09!12;UBERON:0007277!2.05e-09!12;UBERON:0000924!2.10e-09!173;UBERON:0006601!2.10e-09!173;UBERON:0003076!2.67e-09!15;UBERON:0003057!2.67e-09!15;UBERON:0004121!3.05e-09!169;UBERON:0002298!9.60e-09!8;UBERON:0000369!1.06e-08!4;UBERON:0002435!1.06e-08!4;UBERON:0000204!1.06e-08!4;UBERON:0010082!1.06e-08!4;UBERON:0004732!1.44e-08!13;UBERON:0001871!1.65e-08!7;UBERON:0000483!4.74e-08!309;UBERON:0000119!7.77e-08!312;UBERON:0000475!8.14e-08!365;UBERON:0002420!1.00e-07!9;UBERON:0007245!1.00e-07!9;UBERON:0010009!1.00e-07!9;UBERON:0010011!1.00e-07!9;UBERON:0000454!1.00e-07!9;UBERON:0002308!1.40e-07!9;UBERON:0000125!1.40e-07!9;UBERON:0002021!2.05e-07!5;UBERON:0001896!3.76e-07!3;UBERON:0005290!3.76e-07!3;UBERON:0010096!3.76e-07!3;UBERON:0005383!9.41e-07!3;UBERON:0005382!9.41e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.50e-38;20!UBERON:0001869;9.55e-37;32!UBERON:0001893;6.72e-35;34!UBERON:0002619;7.55e-35;22!UBERON:0000956;8.32e-31;25!UBERON:0000203;8.32e-31;25!UBERON:0002791;5.43e-30;32!UBERON:0003528;4.68e-29;34!UBERON:0002020;4.68e-29;34!UBERON:0000200;1.66e-25;6!UBERON:0002780;1.27e-23;41!UBERON:0001890;1.27e-23;41!UBERON:0001870;3.48e-23;3!UBERON:0002581;8.01e-18;1!UBERON:0002022;8.01e-18;1!UBERON:0007190;8.01e-18;1!UBERON:0001017;7.39e-15;75!UBERON:0001872;3.59e-14;5!UBERON:0000955;3.66e-14;68!UBERON:0001016;9.72e-13;83!UBERON:0000073;7.73e-12;53!UBERON:0002616;7.73e-12;53!UBERON:0002702;8.68e-10;2!UBERON:0001873;1.38e-09;2!UBERON:0002360;1.38e-09;2!UBERON:0000094;1.38e-09;2!UBERON:0010743;1.38e-09;2!UBERON:0007023;3.72e-09;114!UBERON:0005383;8.38e-07;3!UBERON:0005382;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.39e-40,32;UBERON:0001950,4.26e-38,20;UBERON:0001893,1.48e-37,34;UBERON:0002619,9.04e-35,22;UBERON:0002791,1.65e-31,32;UBERON:0002780,3.24e-31,41;UBERON:0001890,3.24e-31,41;UBERON:0003080,3.24e-31,41;UBERON:0006240,3.24e-31,41;UBERON:0000956,9.75e-31,25;UBERON:0000203,9.75e-31,25;UBERON:0003528,1.09e-29,34;UBERON:0002020,1.09e-29,34;UBERON:0001017,8.85e-28,81;UBERON:0000955,9.80e-28,68;UBERON:0006238,9.80e-28,68;UBERON:0000200,1.19e-25,6;UBERON:0001016,5.43e-25,89;UBERON:0000073,3.67e-24,53;UBERON:0002616,3.67e-24,53;UBERON:0001870,3.29e-23,3;UBERON:0001049,7.35e-23,56;UBERON:0005068,7.35e-23,56;UBERON:0006241,7.35e-23,56;UBERON:0007135,7.35e-23,56;UBERON:0003056,5.71e-21,61;UBERON:0007190,5.26e-18,1;UBERON:0002581,6.23e-18,1;UBERON:0002022,1.44e-17,1;UBERON:0007023,1.09e-16,114;UBERON:0003075,1.66e-15,82;UBERON:0007284,1.66e-15,82;UBERON:0002346,9.20e-15,86;UBERON:0001872,3.37e-14,5;UBERON:0004121,8.03e-13,171;UBERON:0000924,8.03e-13,171;UBERON:0006601,8.03e-13,171;UBERON:0010371,4.11e-12,104;UBERON:0002702,8.69e-10,2;UBERON:0001873,1.03e-09,2;UBERON:0010122,1.03e-09,2;UBERON:0011216,1.33e-09,223;UBERON:0002360,1.71e-09,2;UBERON:0000094,1.71e-09,2;UBERON:0010743,1.71e-09,2;UBERON:0010314,2.10e-09,132;UBERON:0005383,6.88e-07,3;UBERON:0005382,6.88e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0.409499734223957,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0.123084805461069,0.622079175323615,0,0,0,0.0986434056369336,0,0,0.969332746095218,1.02044907978036,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0,1.77148277162768,0.241192877250816,0,0.110579259931225,0.295547618953547,1.09692698576986,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,1.32952671507345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,1.09349201984444,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,2.65820453990096,0.732157589411779,0.1251909307065,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.963438376446893,4.25089728976755,0,0.615349092722265,0.504143392443436,0.829887029570615,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,0,0.206686796501184,1.26831620387814,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.271878931907327,1.38122824481983,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0,0,1.22384682343646,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25458863311266,0,0,0,0,0,0,0.0814032686109745,0,0,0.449126010532934,0,0.122241444182866,0,0,0,0 | |||
|short_description=p9@SLC1A1 | |||
}} |
Revision as of 00:39, 23 January 2014
Short description: | p9@SLC1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC1A1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 210bp_to_ENST00000262352, uc003zij.1_5end |
EntrezGene: | SLC1A1 |
HGNC: | 10939 |
UniProt: | P43005 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data