FFCP PHASE1:Hg19::chr9:139922671..139922697,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=20 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZC7 | |||
|association_with_transcript=-29bp_to_ENST00000341511_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_ABCA2_5end | |||
|id=chr9:139922671..139922697,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.53e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.82e-25!57;UBERON:0005068!1.82e-25!57;UBERON:0006241!1.82e-25!57;UBERON:0007135!1.82e-25!57;UBERON:0007023!4.94e-24!115;UBERON:0005743!2.09e-23!86;UBERON:0000073!5.20e-23!94;UBERON:0001016!5.20e-23!94;UBERON:0000955!4.12e-22!69;UBERON:0006238!4.12e-22!69;UBERON:0001017!1.42e-21!82;UBERON:0003080!1.50e-20!42;UBERON:0002780!4.07e-20!41;UBERON:0001890!4.07e-20!41;UBERON:0006240!4.07e-20!41;UBERON:0002616!4.78e-20!59;UBERON:0003075!1.29e-18!86;UBERON:0007284!1.29e-18!86;UBERON:0002346!2.84e-18!90;UBERON:0002020!2.41e-17!34;UBERON:0003528!2.41e-17!34;UBERON:0001893!2.49e-17!34;UBERON:0002791!9.96e-17!33;UBERON:0001869!5.46e-16!32;UBERON:0002619!2.51e-14!22;UBERON:0003056!2.85e-14!61;UBERON:0001950!3.90e-13!20;UBERON:0000153!1.08e-12!129;UBERON:0007811!1.08e-12!129;UBERON:0000033!4.99e-12!123;UBERON:0000924!6.73e-12!173;UBERON:0006601!6.73e-12!173;UBERON:0004121!6.95e-12!169;UBERON:0000956!8.32e-12!25;UBERON:0000203!8.32e-12!25;UBERON:0000025!1.21e-08!194;UBERON:0002308!3.38e-07!9;UBERON:0000125!3.38e-07!9;UBERON:0000475!3.72e-07!365;UBERON:0002420!4.85e-07!9;UBERON:0007245!4.85e-07!9;UBERON:0010009!4.85e-07!9;UBERON:0010011!4.85e-07!9;UBERON:0000454!4.85e-07!9;UBERON:0004111!5.80e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.51e-15;41!UBERON:0001890;5.51e-15;41!UBERON:0001893;9.28e-15;34!UBERON:0003528;9.82e-15;34!UBERON:0002020;9.82e-15;34!UBERON:0002791;1.68e-14;32!UBERON:0001869;1.87e-14;32!UBERON:0002619;2.11e-14;22!UBERON:0000073;1.78e-13;53!UBERON:0002616;1.78e-13;53!UBERON:0001950;3.36e-13;20!UBERON:0000956;8.40e-12;25!UBERON:0000203;8.40e-12;25!UBERON:0000955;2.18e-10;68!UBERON:0001017;2.98e-10;75!UBERON:0001016;4.29e-10;83!UBERON:0007023;6.19e-08;114!UBERON:0000125;3.02e-07;9!UBERON:0002308;3.02e-07;9!UBERON:0002420;4.35e-07;9!UBERON:0007245;4.35e-07;9!UBERON:0010009;4.35e-07;9!UBERON:0010011;4.35e-07;9!UBERON:0000454;4.35e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.93e-25,56;UBERON:0005068,4.93e-25,56;UBERON:0006241,4.93e-25,56;UBERON:0007135,4.93e-25,56;UBERON:0007023,7.80e-24,114;UBERON:0000073,4.39e-23,53;UBERON:0002616,4.39e-23,53;UBERON:0000955,1.21e-21,68;UBERON:0006238,1.21e-21,68;UBERON:0001017,5.70e-21,81;UBERON:0001016,1.26e-20,89;UBERON:0002780,3.77e-20,41;UBERON:0001890,3.77e-20,41;UBERON:0003080,3.77e-20,41;UBERON:0006240,3.77e-20,41;UBERON:0003075,1.28e-18,82;UBERON:0007284,1.28e-18,82;UBERON:0002346,3.00e-18,86;UBERON:0003528,2.26e-17,34;UBERON:0002020,2.26e-17,34;UBERON:0001893,2.33e-17,34;UBERON:0002791,4.39e-16,32;UBERON:0001869,5.15e-16,32;UBERON:0003056,1.89e-14,61;UBERON:0002619,2.38e-14,22;UBERON:0001950,3.71e-13,20;UBERON:0010371,2.07e-12,104;UBERON:0000956,7.97e-12,25;UBERON:0000203,7.97e-12,25;UBERON:0010314,9.71e-12,132;UBERON:0004121,1.19e-11,171;UBERON:0000924,1.19e-11,171;UBERON:0006601,1.19e-11,171;UBERON:0011216,8.75e-10,223;UBERON:0000025,2.03e-08,192;UBERON:0000125,3.30e-07,9;UBERON:0002308,3.30e-07,9;UBERON:0002420,4.74e-07,9;UBERON:0007245,4.74e-07,9;UBERON:0010009,4.74e-07,9;UBERON:0010011,4.74e-07,9;UBERON:0000454,4.74e-07,9 | |||
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| |||
|short_description=p1@ABCA2 | |||
}} |
Revision as of 04:15, 23 January 2014
Short description: | p1@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -29bp_to_ENST00000341511_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | Q9BZC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data