FFCP PHASE1:Hg19::chrX:135730373..135730399,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11935 | |||
|TSSclassifier=strong | |||
|UniProt=Q3L8U2 | |||
|association_with_transcript=0bp_to_ENST00000370628_5end | |||
|coexpression_cluster_id=C300 | |||
|description=CAGE_peak_2_at_CD40LG_5end | |||
|id=chrX:135730373..135730399,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.19e-29!18;CL:0000789!4.19e-29!18;CL:0002420!4.19e-29!18;CL:0002419!4.19e-29!18;CL:0000790!4.19e-29!18;CL:0000084!2.75e-26!25;CL:0000827!2.75e-26!25;CL:0000625!2.06e-18!11;CL:0000838!4.27e-14!52;CL:0000542!1.09e-13!53;CL:0000051!1.09e-13!53;CL:0000738!1.08e-11!140;CL:0000624!2.85e-11!6;CL:0002087!2.87e-10!119;CL:0000037!1.02e-09!172;CL:0000566!1.02e-09!172;CL:0000988!1.60e-08!182;CL:0002031!1.77e-08!124;CL:0002032!4.99e-08!165;CL:0000837!4.99e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.56e-41;18!CL:0000789;6.56e-41;18!CL:0002419;6.56e-41;18!CL:0000084;7.86e-32;25!CL:0000625;1.45e-26;11!CL:0000624;1.05e-18;6!CL:0000226;6.60e-10;3!CL:0000842;6.60e-10;3!CL:0000898;6.91e-10;3!CL:0000542;1.20e-08;53!CL:0000815;7.67e-07;2!CL:0000792;7.67e-07;2!CL:0002677;7.67e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.48e-41,18;CL:0000789,6.48e-41,18;CL:0002420,6.48e-41,18;CL:0002419,6.48e-41,18;CL:0000790,6.48e-41,18;CL:0000084,7.87e-32,25;CL:0000827,7.87e-32,25;CL:0000625,1.62e-26,11;CL:0000624,9.11e-19,6;CL:0000838,1.44e-16,52;CL:0000542,3.66e-16,53;CL:0000051,3.66e-16,53;CL:0000898,5.84e-10,3;CL:0002087,6.55e-10,115;CL:0000226,7.02e-10,3;CL:0000842,7.02e-10,3;CL:0000738,2.58e-08,136;CL:0000815,6.50e-07,2;CL:0000792,6.50e-07,2;CL:0002677,6.50e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.56e-41;18!CL:0000051;1.20e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-15!115;UBERON:0000178!1.46e-15!15;UBERON:0000179!1.46e-15!15;UBERON:0000463!1.46e-15!15;UBERON:0004177!1.23e-08!7;UBERON:0002370!1.65e-07!4;UBERON:0005058!1.65e-07!4;UBERON:0009113!1.65e-07!4;UBERON:0003295!1.65e-07!4;UBERON:0005562!1.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.07e-27;15!UBERON:0000179;2.07e-27;15!UBERON:0000463;2.07e-27;15!UBERON:0002390;7.53e-19;32!UBERON:0002193;1.38e-11;42!UBERON:0004177;1.44e-09;5!UBERON:0005057;1.44e-09;5!UBERON:0002370;3.63e-07;2!UBERON:0005058;3.63e-07;2!UBERON:0009113;3.63e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.37e-27,15;UBERON:0000179,2.37e-27,15;UBERON:0000463,2.37e-27,15;UBERON:0004177,1.08e-10,7;UBERON:0005057,1.08e-10,7;UBERON:0002370,8.39e-08,4;UBERON:0005058,8.39e-08,4;UBERON:0009113,8.39e-08,4;UBERON:0003295,8.39e-08,4;UBERON:0005562,8.39e-08,4;UBERON:0003408,2.06e-07,10;UBERON:0002390,3.09e-07,98;UBERON:0003061,3.09e-07,98;UBERON:0002193,5.57e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0706351847777,0.154816123316076,0,0,0,0,0,0,1.10799081706375,1.20326668482085,1.08505435357926,0.223915474239924,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,3.36305137788922,3.68737718685108,12.5894252872853,9.43225830597995,11.719285442972,2.34061093546949,2.93330039970231,5.6813736688168,3.89653456815823,64.840885907171,3.82987679717288,4.2091439970888,1.08321545506006,18.0608760813202,31.2142434143708,84.6855208708932,88.7083557092573,114.472218865346,30.5470320113844,30.767195230317,32.4060123795428,80.3363239725744,23.7596706033191,26.1156858566799,42.5073082592765,12.7426165729639,8.46408490013344,5.70271226669025,7.37818083481087,13.3106075600595,9.99445812418767,15.6272986349051,2.46338399076314,2.62088766192152,1.06976078313403,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.788123040807709,2.80315847317372,2.82354679815446,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65041696654683,4.96142661882819,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,7.61171413848254,5.35246044999663,5.12682468456746,6.4322579373603,9.04997000789627,7.78167973431261,9.72056587028607,4.75875105776562,0,0,0,0,0,0.0711418433484141,1.11598390910176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66457574398256,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,3.86797481743607,0,0,0,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.635746315921515,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,1.09279780251979,0,0.245148321753905,0,0,0,0,0,1.12780701575824,1.4180735354187,0,0,0,0,0,1.37618785021362,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.639701945702943,0.714193294391221,7.75066918032073,3.97278171493491,0,0,0,0,0,3.36760265072938,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,2.21401172950129,0.320568492303233 | |||
|short_description=p2@CD40LG | |||
}} |
Revision as of 07:05, 23 January 2014
Short description: | p2@CD40LG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD40LG_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | 0bp_to_ENST00000370628_5end |
EntrezGene: | CD40LG |
HGNC: | 11935 |
UniProt: | Q3L8U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.48e-41 | 18 |
alpha-beta T cell | 6.48e-41 | 18 |
immature T cell | 6.48e-41 | 18 |
mature T cell | 6.48e-41 | 18 |
immature alpha-beta T cell | 6.48e-41 | 18 |
T cell | 7.87e-32 | 25 |
pro-T cell | 7.87e-32 | 25 |
CD8-positive, alpha-beta T cell | 1.62e-26 | 11 |
CD4-positive, alpha-beta T cell | 9.11e-19 | 6 |
lymphoid lineage restricted progenitor cell | 1.44e-16 | 52 |
lymphocyte | 3.66e-16 | 53 |
common lymphoid progenitor | 3.66e-16 | 53 |
naive T cell | 5.84e-10 | 3 |
nongranular leukocyte | 6.55e-10 | 115 |
single nucleate cell | 7.02e-10 | 3 |
mononuclear cell | 7.02e-10 | 3 |
leukocyte | 2.58e-08 | 136 |
regulatory T cell | 6.50e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.50e-07 | 2 |
naive regulatory T cell | 6.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.37e-27 | 15 |
haemolymphatic fluid | 2.37e-27 | 15 |
organism substance | 2.37e-27 | 15 |
hemopoietic organ | 1.08e-10 | 7 |
immune organ | 1.08e-10 | 7 |
thymus | 8.39e-08 | 4 |
hemolymphoid system gland | 8.39e-08 | 4 |
thymic region | 8.39e-08 | 4 |
pharyngeal gland | 8.39e-08 | 4 |
thymus primordium | 8.39e-08 | 4 |
gland of gut | 2.06e-07 | 10 |
hematopoietic system | 3.09e-07 | 98 |
blood island | 3.09e-07 | 98 |
hemolymphoid system | 5.57e-07 | 108 |