FFCP PHASE1:Hg19::chrX:152162653..152162667,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18743 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PV4 | |||
|association_with_transcript=3bp_to_ENST00000535214,NM_001184924_5end | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_1_at_PNMA5_5end | |||
|id=chrX:152162653..152162667,- | |||
|ontology_enrichment_celltype=CL:0002322!6.04e-22!5;CL:0002541!5.42e-10!3;CL:0000039!1.88e-09!7;CL:0000586!1.88e-09!7;CL:0002553!2.17e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.57e-10;2!CL:0002178;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.57e-10,2;CL:0002178,2.05e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.01e-16;10!UBERON:0005564;1.01e-16;10 | |||
|ontology_enrichment_disease=DOID:0060085!4.72e-08!1;DOID:3165!4.72e-08!1;DOID:0060121!4.72e-08!1;DOID:2438!4.72e-08!1;DOID:4418!4.72e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.20e-14!8;UBERON:0003135!1.68e-10!11;UBERON:0000476!5.42e-10!3;UBERON:0000920!5.42e-10!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.02e-20;8!UBERON:0003135;2.88e-15;11!UBERON:0000991;2.71e-08;21!UBERON:0003101;6.08e-08;22!UBERON:0000079;6.08e-08;22!UBERON:0002110;1.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.02e-20,8;UBERON:0003135,2.88e-15,11;UBERON:0000991,2.71e-08,21;UBERON:0009196,2.71e-08,21;UBERON:0009117,2.71e-08,21;UBERON:0005564,2.71e-08,21;UBERON:0004176,6.08e-08,22;UBERON:0003101,6.08e-08,22;UBERON:0000079,6.08e-08,22;UBERON:0002110,1.93e-07,3;UBERON:0006242,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.86388272718252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12493582569533,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,238.57268693646,0,0,168.239691268154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,349.179753563668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,25.5571660284792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0,2.50707539292375,2.8795905322931,14.2020988982775,0,0,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0,0,163.50629388466,0,0,0,0,0,0,0,0 | |||
|short_description=p1@PNMA5 | |||
}} |
Revision as of 07:23, 23 January 2014
Short description: | p1@PNMA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNMA5_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | 3bp_to_ENST00000535214, NM_001184924_5end |
EntrezGene: | PNMA5 |
HGNC: | 18743 |
UniProt: | Q96PV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.57e-10 | 2 |
epithelial cell of stomach | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.02e-20 | 8 |
male reproductive organ | 2.88e-15 | 11 |
gonad | 2.71e-08 | 21 |
indifferent external genitalia | 2.71e-08 | 21 |
indifferent gonad | 2.71e-08 | 21 |
gonad primordium | 2.71e-08 | 21 |
external genitalia | 6.08e-08 | 22 |
male organism | 6.08e-08 | 22 |
male reproductive system | 6.08e-08 | 22 |
gallbladder | 1.93e-07 | 3 |
gall bladder primordium | 1.93e-07 | 3 |