CL:0000094: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A leukocyte with abundant granules in the cytoplasm." [GOC:amm, GOC:tfm, MESH:A.11.118.637.415] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000094 | |||
|is_a=CL:0000081 ;;CL:0000766 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=granulocyte | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |||
|subset= | |||
|synonym="granular leucocyte" EXACT [];;"granular leukocyte" EXACT [];;"polymorphonuclear leukocyte" EXACT [] | |||
|union_of= | |||
|xref=BTO:0000539;;BTO:0001026;;FMA:62854 | |||
}} | }} |
Latest revision as of 16:29, 12 September 2014
Name: | granulocyte | |
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Namespace: | FANTOM | |
Definition: | "A leukocyte with abundant granules in the cytoplasm." [GOC:amm, GOC:tfm, MESH:A.11.118.637.415] | |
Xrefs: |
| |
Synonyms: |
"granular leucocyte" EXACT [] "granular leukocyte" EXACT [] "polymorphonuclear leukocyte" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000081(blood cell),CL:0000766(myeloid leukocyte) |
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Children
is a: | FF:0000214 (CD15-positive granulocyte),CL:0000767 (basophil),CL:0000771 (eosinophil),CL:0000775 (neutrophil) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11233-116C9 (Neutrophils, donor1)
- 11314-117C9 (Neutrophils, donor2)
- 11390-118C4 (Neutrophils, donor3)
- 11542-120B3
- 11546-120B7
- 11622-122B2
- 11626-122B6
- 11703-123B2
- 11707-123B6
- 12133-128D9 (neutrophil PMN, donor1)
... further results Mouse (Mus musculus)
- 11233-116C9 (Neutrophils, donor1)
- 11314-117C9 (Neutrophils, donor2)
- 11390-118C4 (Neutrophils, donor3)
- 11542-120B3
- 11546-120B7
- 11622-122B2
- 11626-122B6
- 11703-123B2
- 11707-123B6
- 12133-128D9 (neutrophil PMN, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000094 (granulocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data