CL:0000894: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A pro-T cell that has the phenotype CD4-negative, CD8-negative, CD44-positive, and CD25-negative." [GO_REF:0000031, GOC:add, GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=CL:0002425 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000894 | |||
|is_a=CL:0000827 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=DN1 thymic pro-T cell | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002370 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
| | |subset= | ||
| | |synonym="DN1 thymic pro-T lymphocyte" EXACT [];;"DN1 thymic pro-T-cell" EXACT [];;"DN1 thymic pro-T-lymphocyte" EXACT [];;"DN1 thymic progenitor T cell" EXACT [];;"DN1 thymocyte" EXACT [];;"double negative 1" EXACT [];;"preT.DN1.Th" EXACT [] | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:38, 12 September 2014
| Name: | DN1 thymic pro-T cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A pro-T cell that has the phenotype CD4-negative, CD8-negative, CD44-positive, and CD25-negative." [GO_REF:0000031, GOC:add, GOC:tfm] |
| Synonyms: |
"DN1 thymic pro-T lymphocyte" EXACT [] "DN1 thymic pro-T-cell" EXACT [] "DN1 thymic pro-T-lymphocyte" EXACT [] "DN1 thymic progenitor T cell" EXACT [] "DN1 thymocyte" EXACT [] "double negative 1" EXACT [] "preT.DN1.Th" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000827(pro-T cell) |
|---|---|
| develops_from: | CL:0002425(early T lineage precursor) |
| part_of: | UBERON:0002370(thymus) |
Children
| develops from: | CL:0000806 (DN2 thymocyte) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000894 (DN1 thymic pro-T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
