CL:0002397: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment=Markers are associated with human cells. | |comment=Markers are associated with human cells. | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="An intermediate monocyte that is CD14-positive, CD16-positive." [GOC:tfm, PMID:20628149] | ||
|derives_from= | |derives_from= | ||
|develops_from=CL:0002057 | |develops_from=CL:0002057 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002397 | |||
|is_a=CL:0001054 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=CD14-positive, CD16-positive monocyte | |||
|namespace=FANTOM | |||
|obo_creation_date=2010-10-04T12:49:47Z | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:42, 12 September 2014
| Name: | CD14-positive, CD16-positive monocyte |
|---|---|
| Namespace: | FANTOM |
| Definition: | "An intermediate monocyte that is CD14-positive, CD16-positive." [GOC:tfm, PMID:20628149] |
| Comments: | Markers are associated with human cells. |
| Created by: | tmeehan |
| Creation date: | 2010-10-04T12:49:47Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0001054(CD14-positive monocyte) |
|---|---|
| develops_from: | CL:0002057(CD14-positive, CD16-negative classical monocyte) |
Children
| is a: | FF:0011112 (CD14-positiveCD16-positive Monocytes) |
|---|---|
| derives from: | FF:0011100 (human CD14-CD16-positive Monocytes sample) |
| develops from: | CL:0002396 (CD14-low, CD16-positive monocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11224-116B9 (CD14+ Monocytes, donor1)
- 11305-117B9 (CD14+ Monocytes, donor2)
- 11381-118B4 (CD14+ Monocytes, donor3)
- 11789-124B7 (CD14+CD16+ Monocytes, donor1)
- 11801-124D1 (CD14+CD16+ Monocytes, donor2)
- 11912-125G4 (CD14+CD16+ Monocytes, donor3)
- 12149-128F7
- 12172-128I3
- 12187-129A9
- 12192-129B5
... further results Mouse (Mus musculus)
- 11224-116B9 (CD14+ Monocytes, donor1)
- 11305-117B9 (CD14+ Monocytes, donor2)
- 11381-118B4 (CD14+ Monocytes, donor3)
- 11789-124B7 (CD14+CD16+ Monocytes, donor1)
- 11801-124D1 (CD14+CD16+ Monocytes, donor2)
- 11912-125G4 (CD14+CD16+ Monocytes, donor3)
- 12149-128F7
- 12172-128I3
- 12187-129A9
- 12192-129B5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002397 (CD14-positive, CD16-positive monocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.97e-155 | FFCP PHASE1:Hg19::chr1:42230480..42230491,+#_893987a8c605162803d755af970c11a9 | p@chr1:42230480..42230491, + |
| 9.97e-155 | FFCP PHASE2:Hg19::chr1:42230480..42230491,+#_893987a8c605162803d755af970c11a9 | p@chr1:42230480..42230491, + |
| 1.49e-154 | FFCP PHASE1:Hg19::chr10:115080077..115080087,-#_22e72f442756634c09e16468cc72f4b2 | p@chr10:115080077..115080087, - |
| 1.49e-154 | FFCP PHASE2:Hg19::chr10:115080077..115080087,-#_22e72f442756634c09e16468cc72f4b2 | p@chr10:115080077..115080087, - |
| 3.26e-139 | FFCP PHASE1:Hg19::chr7:2797828..2797848,-#_c3bb16af93fee837bf2295a42eacc850 | p@chr7:2797828..2797848, - |
| 3.26e-139 | FFCP PHASE2:Hg19::chr7:2797828..2797848,-#_c3bb16af93fee837bf2295a42eacc850 | p@chr7:2797828..2797848, - |
| 1.42e-130 | FFCP PHASE1:Hg19::chr10:115070193..115070207,-#_162493bddda7a63ec3dc4f7f1b62ab1c | p@chr10:115070193..115070207, - |
| 1.42e-130 | FFCP PHASE2:Hg19::chr10:115070193..115070207,-#_162493bddda7a63ec3dc4f7f1b62ab1c | p@chr10:115070193..115070207, - |
| 1.42e-130 | FFCP PHASE2:Hg19::chr1:161519682..161519691,-#_162493bddda7a63ec3dc4f7f1b62ab1c | p7@FCGR3A |
| 1.42e-130 | FFCP PHASE1:Hg19::chr1:161519682..161519691,-#_162493bddda7a63ec3dc4f7f1b62ab1c | p7@FCGR3A |
| 3.02e-112 | FFCP PHASE1:Hg19::chr15:75080883..75080890,+#_f2b5e74a37644da463cf460819305cb1 | p14@CSK |
| 3.02e-112 | FFCP PHASE2:Hg19::chr15:75080883..75080890,+#_f2b5e74a37644da463cf460819305cb1 | p14@CSK |
| 3.02e-112 | FFCP PHASE2:Hg19::chr17:47287786..47287800,-#_f2b5e74a37644da463cf460819305cb1 | p@chr17:47287786..47287800, - |
| 3.02e-112 | FFCP PHASE1:Hg19::chr17:47287786..47287800,-#_f2b5e74a37644da463cf460819305cb1 | p@chr17:47287786..47287800, - |
| 4.43e-112 | FFCP PHASE2:Hg19::chr7:20581377..20581387,-#_9affeb8a57c12780db0bc5a672f734f7 | p@chr7:20581377..20581387, - |
| 4.43e-112 | FFCP PHASE1:Hg19::chr7:20581377..20581387,-#_9affeb8a57c12780db0bc5a672f734f7 | p@chr7:20581377..20581387, - |
| 4.43e-112 | FFCP PHASE1:Hg19::chr3:188118437..188118443,+#_9affeb8a57c12780db0bc5a672f734f7 | p@chr3:188118437..188118443, + |
| 4.43e-112 | FFCP PHASE1:Hg19::chr4:2794535..2794549,-#_9affeb8a57c12780db0bc5a672f734f7 | p@chr4:2794535..2794549, - |
| 4.43e-112 | FFCP PHASE2:Hg19::chr4:2794535..2794549,-#_9affeb8a57c12780db0bc5a672f734f7 | p@chr4:2794535..2794549, - |
| 4.43e-112 | FFCP PHASE2:Hg19::chr3:188118437..188118443,+#_9affeb8a57c12780db0bc5a672f734f7 | p@chr3:188118437..188118443, + |
| 4.6e-109 | FFCP PHASE2:Hg19::chr15:22538560..22538601,-#_183b004d84f790e80560c3b679c90953 | p@chr15:22538560..22538601, - |
| 4.6e-109 | FFCP PHASE1:Hg19::chr15:22538560..22538601,-#_183b004d84f790e80560c3b679c90953 | p@chr15:22538560..22538601, - |
| 4.6e-109 | FFCP PHASE1:Hg19::chr10:43609342..43609351,+#_183b004d84f790e80560c3b679c90953 | p@chr10:43609342..43609351, + |
| 4.6e-109 | FFCP PHASE2:Hg19::chr11:109964597..109964601,-#_183b004d84f790e80560c3b679c90953 | p@chr11:109964597..109964601, - |
| 4.6e-109 | FFCP PHASE1:Hg19::chr11:109964597..109964601,-#_183b004d84f790e80560c3b679c90953 | p@chr11:109964597..109964601, - |
| 4.6e-109 | FFCP PHASE2:Hg19::chr10:43609342..43609351,+#_183b004d84f790e80560c3b679c90953 | p@chr10:43609342..43609351, + |
| 2.5e-107 | FFCP PHASE2:Hg19::chr8:11716298..11716315,-#_30436e898107fcc2c145f1858ded93d5 | p@chr8:11716298..11716315, - |
| 2.5e-107 | FFCP PHASE1:Hg19::chr8:11716298..11716315,-#_30436e898107fcc2c145f1858ded93d5 | p@chr8:11716298..11716315, - |
| 2.26e-103 | FFCP PHASE1:Hg19::chr2:16845595..16845603,-#_496eb7ebb72b5f61b18a1efa423e7c28 | p@chr2:16845595..16845603, - |
| 2.26e-103 | FFCP PHASE2:Hg19::chr2:16845595..16845603,-#_496eb7ebb72b5f61b18a1efa423e7c28 | p@chr2:16845595..16845603, - |
| 7.39e-99 | FFCP PHASE1:Hg19::chr11:60722191..60722202,+#_8f5a525a3fa27f507daf9b759f2990c3 | p@chr11:60722191..60722202, + |
| 7.39e-99 | FFCP PHASE2:Hg19::chr11:60722191..60722202,+#_8f5a525a3fa27f507daf9b759f2990c3 | p@chr11:60722191..60722202, + |
| 7.69e-99 | FFCP PHASE2:Hg19::chr9:136709727..136709738,+#_68508b83e2f834a6d8ae03ce2ffd7a69 | p@chr9:136709727..136709738, + |
| 7.69e-99 | FFCP PHASE1:Hg19::chr9:136709727..136709738,+#_68508b83e2f834a6d8ae03ce2ffd7a69 | p@chr9:136709727..136709738, + |
| 2.01e-98 | FFCP PHASE2:Hg19::chr9:137267629..137267639,-#_c87fbbaa489c218db5974c36bdb847e0 | p@chr9:137267629..137267639, - |
| 2.01e-98 | FFCP PHASE1:Hg19::chr9:137267629..137267639,-#_c87fbbaa489c218db5974c36bdb847e0 | p@chr9:137267629..137267639, - |
| 2.82e-98 | FFCP PHASE2:Hg19::chr6:31584663..31584673,-#_3c8a5915ecd9d94efa8c6e92eee7bca7 | p@chr6:31584663..31584673, - |
| 2.82e-98 | FFCP PHASE1:Hg19::chr6:31584663..31584673,-#_3c8a5915ecd9d94efa8c6e92eee7bca7 | p@chr6:31584663..31584673, - |
| 5.98e-94 | FFCP PHASE1:Hg19::chr17:81148156..81148167,-#_c1afc3d38c625e91846719b10b734995 | p@chr17:81148156..81148167, - |
| 5.98e-94 | FFCP PHASE2:Hg19::chr17:81148156..81148167,-#_c1afc3d38c625e91846719b10b734995 | p@chr17:81148156..81148167, - |
| 5.85e-93 | FFCP PHASE1:Hg19::chr2:208368220..208368233,+#_f22a164859b16b4e2d7fa840f48591c9 | p@chr2:208368220..208368233, + |
| 5.85e-93 | FFCP PHASE2:Hg19::chr2:208368220..208368233,+#_f22a164859b16b4e2d7fa840f48591c9 | p@chr2:208368220..208368233, + |
| 4.91e-91 | FFCP PHASE2:Hg19::chr17:40351201..40351230,+#_e8d647b67de29dc2ebea00ce141b87e3 | p@chr17:40351201..40351230, + |
| 4.91e-91 | FFCP PHASE1:Hg19::chr17:40351201..40351230,+#_e8d647b67de29dc2ebea00ce141b87e3 | p@chr17:40351201..40351230, + |
| 5.21e-88 | FFCP PHASE1:Hg19::chr3:101592712..101592731,+#_200e4aed959bdf6fe34668bd7e312732 | p@chr3:101592712..101592731, + |
| 5.21e-88 | FFCP PHASE2:Hg19::chr3:101592712..101592731,+#_200e4aed959bdf6fe34668bd7e312732 | p@chr3:101592712..101592731, + |
| 8.49e-88 | FFCP PHASE1:Hg19::chr19:50285177..50285181,+#_d77fd43ca798dcaa8bab18e6bb9519f6 | p@chr19:50285177..50285181, + |
| 8.49e-88 | FFCP PHASE2:Hg19::chr19:50285177..50285181,+#_d77fd43ca798dcaa8bab18e6bb9519f6 | p@chr19:50285177..50285181, + |
| 9.86e-88 | FFCP PHASE1:Hg19::chr7:2673688..2673709,-#_f6ab37b15e9aae668ee5d9efd28a58f3 | p@chr7:2673688..2673709, - |
| 9.86e-88 | FFCP PHASE2:Hg19::chr7:2673688..2673709,-#_f6ab37b15e9aae668ee5d9efd28a58f3 | p@chr7:2673688..2673709, - |
| 1.37e-87 | FFCP PHASE2:Hg19::chr8:144480343..144480350,-#_f4c157332f95562ff2706796028e7eb2 | p@chr8:144480343..144480350, - |
| 1.37e-87 | FFCP PHASE1:Hg19::chr8:144480343..144480350,-#_f4c157332f95562ff2706796028e7eb2 | p@chr8:144480343..144480350, - |
| 2.08e-87 | FFCP PHASE2:Hg19::chr6:144952186..144952227,+#_704450ee3892a033168248cdf126c268 | p@chr6:144952186..144952227, + |
| 2.08e-87 | FFCP PHASE1:Hg19::chr6:144952186..144952227,+#_704450ee3892a033168248cdf126c268 | p@chr6:144952186..144952227, + |
| 5.09e-87 | FFCP PHASE2:Hg19::chr12:133065759..133065769,-#_794278355b8ae5d1837284b97525887c | p@chr12:133065759..133065769, - |
| 5.09e-87 | FFCP PHASE1:Hg19::chr12:133065759..133065769,-#_794278355b8ae5d1837284b97525887c | p@chr12:133065759..133065769, - |
| 1.01e-83 | FFCP PHASE2:Hg19::chr5:1503650..1503661,-#_71876d3d989b6570daf040c237a65058 | p@chr5:1503650..1503661, - |
| 1.01e-83 | FFCP PHASE1:Hg19::chr5:1503650..1503661,-#_71876d3d989b6570daf040c237a65058 | p@chr5:1503650..1503661, - |
| 3.51e-83 | FFCP PHASE1:Hg19::chr3:101592758..101592794,+#_d4f247eed4c959e37427ce9c9b5e7a2b | p@chr3:101592758..101592794, + |
| 3.51e-83 | FFCP PHASE2:Hg19::chr3:101592758..101592794,+#_d4f247eed4c959e37427ce9c9b5e7a2b | p@chr3:101592758..101592794, + |
| 8.72e-83 | FFCP PHASE2:Hg19::chr7:2673037..2673047,-#_71104cbb21be0cb9eaad1835a55bb171 | p@chr7:2673037..2673047, - |
| 8.72e-83 | FFCP PHASE1:Hg19::chr7:2673037..2673047,-#_71104cbb21be0cb9eaad1835a55bb171 | p@chr7:2673037..2673047, - |
| 2.39e-82 | FFCP PHASE2:Hg19::chr3:101618082..101618090,+#_a4ecd01369131e5e923b28b3e6d37954 | p@chr3:101618082..101618090, + |
| 2.39e-82 | FFCP PHASE1:Hg19::chr3:101618082..101618090,+#_a4ecd01369131e5e923b28b3e6d37954 | p@chr3:101618082..101618090, + |
| 2.79e-82 | FFCP PHASE2:Hg19::chr9:27701766..27701787,-#_42b21e61a68386c6cbeef6a4b6e26454 | p@chr9:27701766..27701787, - |
| 2.79e-82 | FFCP PHASE1:Hg19::chr9:27701766..27701787,-#_42b21e61a68386c6cbeef6a4b6e26454 | p@chr9:27701766..27701787, - |
| 3.43e-82 | FFCP PHASE1:Hg19::chr7:77429034..77429040,-#_143f3e5614b671fc689922144b2cf46c | p@chr7:77429034..77429040, - |
| 3.43e-82 | FFCP PHASE2:Hg19::chr7:77429034..77429040,-#_143f3e5614b671fc689922144b2cf46c | p@chr7:77429034..77429040, - |
| 3.45e-82 | FFCP PHASE2:Hg19::chr1:151917057..151917078,-#_48a853fdd0ba3567136295c6b947caf9 | p@chr1:151917057..151917078, - |
| 3.45e-82 | FFCP PHASE1:Hg19::chr1:151917057..151917078,-#_48a853fdd0ba3567136295c6b947caf9 | p@chr1:151917057..151917078, - |
| 6.03e-80 | FFCP PHASE2:Hg19::chr10:115082678..115082691,-#_53caec7115de851022fad3f81cc16223 | p@chr10:115082678..115082691, - |
| 6.03e-80 | FFCP PHASE1:Hg19::chr10:115082678..115082691,-#_53caec7115de851022fad3f81cc16223 | p@chr10:115082678..115082691, - |
| 3.09e-79 | FFCP PHASE1:Hg19::chr6:144980558..144980569,+#_24a8d85147e71d2f01729e36831fd22d | p30@UTRN |
| 3.09e-79 | FFCP PHASE2:Hg19::chr3:50658125..50658131,+#_24a8d85147e71d2f01729e36831fd22d | p@chr3:50658125..50658131, + |
| 3.09e-79 | FFCP PHASE1:Hg19::chr3:50658125..50658131,+#_24a8d85147e71d2f01729e36831fd22d | p@chr3:50658125..50658131, + |
| 3.09e-79 | FFCP PHASE2:Hg19::chr6:144980558..144980569,+#_24a8d85147e71d2f01729e36831fd22d | p30@UTRN |
| 3.53e-79 | FFCP PHASE2:Hg19::chr16:1538881..1538887,+#_fbb29fac674eff7b69526ace2b695579 | p@chr16:1538881..1538887, + |
| 3.53e-79 | FFCP PHASE1:Hg19::chr16:1538881..1538887,+#_fbb29fac674eff7b69526ace2b695579 | p@chr16:1538881..1538887, + |
| 6.06e-79 | FFCP PHASE1:Hg19::chr17:7034579..7034590,+#_e52755c111f243aae4cd94b08327b995 | p@chr17:7034579..7034590, + |
| 6.06e-79 | FFCP PHASE2:Hg19::chr17:7034579..7034590,+#_e52755c111f243aae4cd94b08327b995 | p@chr17:7034579..7034590, + |
| 1.36e-78 | FFCP PHASE2:Hg19::chr17:72776516..72776526,+#_f6e7c51fb7c0ebf28bc3b31c89da4463 | p@chr17:72776516..72776526, + |
| 1.36e-78 | FFCP PHASE1:Hg19::chr17:72776516..72776526,+#_f6e7c51fb7c0ebf28bc3b31c89da4463 | p@chr17:72776516..72776526, + |
| 2.03e-78 | FFCP PHASE1:Hg19::chr12:116971460..116971463,+#_600e2cf390c5247dde98af7e4b1807ec | p@chr12:116971460..116971463, + |
| 2.03e-78 | FFCP PHASE2:Hg19::chr12:116971460..116971463,+#_600e2cf390c5247dde98af7e4b1807ec | p@chr12:116971460..116971463, + |
| 3.18e-78 | FFCP PHASE2:Hg19::chr19:50283684..50283702,+#_21695221ab663fdaff3869a6a8c8c975 | p@chr19:50283684..50283702, + |
| 3.18e-78 | FFCP PHASE1:Hg19::chr19:50283684..50283702,+#_21695221ab663fdaff3869a6a8c8c975 | p@chr19:50283684..50283702, + |
| 3.75e-78 | FFCP PHASE1:Hg19::chr7:155055063..155055078,+#_5bad3c0b8749e7556180c0a20bd472d6 | p@chr7:155055063..155055078, + |
| 3.75e-78 | FFCP PHASE2:Hg19::chr7:155055063..155055078,+#_5bad3c0b8749e7556180c0a20bd472d6 | p@chr7:155055063..155055078, + |
| 4.4e-78 | FFCP PHASE2:Hg19::chr16:1538765..1538796,-#_cdc6c0e14a120b0e68fab8d3abdcd214 | p1@PTX4 |
| 4.4e-78 | FFCP PHASE1:Hg19::chr16:1538765..1538796,-#_cdc6c0e14a120b0e68fab8d3abdcd214 | p1@PTX4 |
| 1.01e-77 | FFCP PHASE2:Hg19::chr10:60026744..60026760,-#_bd40c16f96cc129148b0fe34a46feafb | p@chr10:60026744..60026760, - |
| 1.01e-77 | FFCP PHASE1:Hg19::chr10:60026744..60026760,-#_bd40c16f96cc129148b0fe34a46feafb | p@chr10:60026744..60026760, - |
| 1.37e-77 | FFCP PHASE2:Hg19::chr11:88071295..88071324,-#_38526171e6060efa4f1f2b087afc76a5 | p5@CTSC |
| 1.37e-77 | FFCP PHASE1:Hg19::chr11:88071295..88071324,-#_38526171e6060efa4f1f2b087afc76a5 | p5@CTSC |
| 2.67e-75 | FFCP PHASE1:Hg19::chr7:139529773..139529801,+#_cd039346cbc80387d8ee6e17b6ed7ea7 | p1@AK130708 |
| 2.67e-75 | FFCP PHASE2:Hg19::chr7:139529773..139529801,+#_cd039346cbc80387d8ee6e17b6ed7ea7 | p1@AK130708 |
| 7.66e-75 | FFCP PHASE1:Hg19::chr8:52811117..52811133,+#_0ca446e8d8c170b6eedaba581d02812c | p@chr8:52811117..52811133, + |
| 7.66e-75 | FFCP PHASE2:Hg19::chr8:52811117..52811133,+#_0ca446e8d8c170b6eedaba581d02812c | p@chr8:52811117..52811133, + |
| 1.39e-74 | FFCP PHASE2:Hg19::chr17:81039792..81039812,+#_d4b45fe769c35e96bc190b4ddadb66f8 | p@chr17:81039792..81039812, + |
| 1.39e-74 | FFCP PHASE1:Hg19::chr17:81039792..81039812,+#_d4b45fe769c35e96bc190b4ddadb66f8 | p@chr17:81039792..81039812, + |
