CL:0002588: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A smooth muscle cell of the umbilical vein." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002588 | |||
|is_a=CL:0000359 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=smooth muscle cell of the umbilical vein | |||
|namespace=FANTOM | |||
|obo_creation_date=2011-03-06T05:00:51Z | |||
|part_of=UBERON:0002066 | |part_of=UBERON:0002066 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} |
Latest revision as of 16:45, 12 September 2014
Name: | smooth muscle cell of the umbilical vein |
---|---|
Namespace: | FANTOM |
Definition: | "A smooth muscle cell of the umbilical vein." [GOC:tfm] |
Created by: | tmeehan |
Creation date: | 2011-03-06T05:00:51Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000359(vascular associated smooth muscle cell) |
---|---|
part_of: | UBERON:0002066(umbilical vein) |
Children
derives from: | FF:0000177 (human smooth muscle cell of umbilical vein sample) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11541-120B2 (Smooth Muscle Cells - Umbilical Vein, donor1)
- 11621-122B1 (Smooth Muscle Cells - Umbilical Vein, donor2)
- 11702-123B1 (Smooth Muscle Cells - Umbilical Vein, donor3)
Mouse (Mus musculus)
- 11541-120B2 (Smooth Muscle Cells - Umbilical Vein, donor1)
- 11621-122B1 (Smooth Muscle Cells - Umbilical Vein, donor2)
- 11702-123B1 (Smooth Muscle Cells - Umbilical Vein, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002588 (smooth muscle cell of the umbilical vein), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data