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UBERON:0002066

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Name:umbilical vein
Namespace:FANTOM
Definition:"The umbilical vein is a blood vessel present during fetal development that carries oxygenated blood from the placenta to the growing fetus. [WP,unvetted]." [Wikipedia:Umbilical_vein]
Xrefs:
links:

BTO:0001509
EFO:0001940
EHDAA:1034
EHDAA:488
EMAPA:16243
EMAPA:16375
EV:0100392
FMA:70317
GAID:542
[ Gray502.png Gray502.png]
[ 200px-Gray502.png 200px-Gray502.png]
MA:0002249
MESH:A.07.231.908.670.874
ncithesaurus:Umbilical_Vein
OpenCyc:Mx4rdu17MmWaEd2AAABQjYGu0g
RETIRED_EHDAA2:0002107
SCTID:367567000

VHOG:0000015
Synonyms: "vena umbilicalis" RELATED LATIN [Wikipedia:Umbilical_vein]
Alt_id: UBERON:FMA_70317-MA_0002249
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001638(vein),UBERON:0010260(umbilical blood vessel)



Children

part of:FF:0000177 (human smooth muscle cell of umbilical vein sample),CL:0002588 (smooth muscle cell of the umbilical vein),CL:0002618 (endothelial cell of umbilical vein)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
  • 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
  • 11400-118D5 (Endothelial Cells - Umbilical vein, donor3)
  • 11541-120B2 (Smooth Muscle Cells - Umbilical Vein, donor1)
  • 11621-122B1 (Smooth Muscle Cells - Umbilical Vein, donor2)
  • 11702-123B1 (Smooth Muscle Cells - Umbilical Vein, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002066 (umbilical vein), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data