DOID:5093: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id=DOID:3937 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="An organ system cancer located_in the thoracic cavity that develops in the different types of cells within the lungs, as well as less common cancers of the esophagus, the trachea, or the chest wall." [url:http://www.advocatehealth.com/cmc/body.cfm?id | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:5093 | |||
|is_a=DOID:0050686 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=thoracic cancer | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym="Thoracic tumor" EXACT [NCI2004_11_17:C3406];;"thorax cancer" EXACT [];;"thorax neoplasm" EXACT [CSP2005:2005-5041];;"tumor of thorax (disorder)" EXACT [SNOMEDCT_2005_07_31:255058005] | ||
|union_of= | |||
|xref=MSH:D013899;;NCI:C3406;;SNOMEDCT_2010_1_31:188361007;;SNOMEDCT_2010_1_31:188365003;;SNOMEDCT_2010_1_31:255058005;;UMLS_CUI:C0039981;;UMLS_CUI:C0153661 | |||
}} | }} |
Latest revision as of 16:52, 12 September 2014
Name: | thoracic cancer | |
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Namespace: | FANTOM | |
Definition: | "An organ system cancer located_in the thoracic cavity that develops in the different types of cells within the lungs, as well as less common cancers of the esophagus, the trachea, or the chest wall." [url:http://www.advocatehealth.com/cmc/body.cfm?id | |
Xrefs: |
| |
Synonyms: |
"Thoracic tumor" EXACT [NCI2004_11_17:C3406] "thorax cancer" EXACT [] "thorax neoplasm" EXACT [CSP2005:2005-5041] "tumor of thorax (disorder)" EXACT [SNOMEDCT_2005_07_31:255058005] | |
Alt_id: | DOID:3937 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:0050686(organ system cancer) |
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Children
is a: | DOID:1612 (breast cancer) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10779-110G5
- 13031-139E7 (MCF7 breast cancer cell line response to EGF1, 00hr00min, biol_rep1)
- 13032-139E8 (MCF7 breast cancer cell line response to EGF1)
- 13033-139E9 (MCF7 breast cancer cell line response to EGF1)
- 13034-139F1 (MCF7 breast cancer cell line response to EGF1)
- 13035-139F2 (MCF7 breast cancer cell line response to EGF1)
- 13036-139F3 (MCF7 breast cancer cell line response to EGF1)
- 13037-139F4 (MCF7 breast cancer cell line response to EGF1)
... further results Mouse (Mus musculus)
- 10419-106C5 (breast carcinoma cell line:MDA-MB-453)
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10779-110G5
- 13031-139E7 (MCF7 breast cancer cell line response to EGF1, 00hr00min, biol_rep1)
- 13032-139E8 (MCF7 breast cancer cell line response to EGF1)
- 13033-139E9 (MCF7 breast cancer cell line response to EGF1)
- 13034-139F1 (MCF7 breast cancer cell line response to EGF1)
- 13035-139F2 (MCF7 breast cancer cell line response to EGF1)
- 13036-139F3 (MCF7 breast cancer cell line response to EGF1)
- 13037-139F4 (MCF7 breast cancer cell line response to EGF1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5093 (thoracic cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data