UBERON:0000487: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:CARO_0000070-FMA_45565-ZFA_0001498 | ||
|comment=This class was created automatically from a combination of ontologies | |comment=This class was created automatically from a combination of ontologies | ||
|created_by= | |created_by= | ||
| | |def="Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium.[FMA]" [CARO:MAH, FMA:45565, Wikipedia:Simple_squamous_epithelium] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000487 | |||
|is_a=UBERON:0000490 ;;UBERON:0006914 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=simple squamous epithelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[AAO]" xsd:string;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[CARO]" xsd:string;;UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[TAO]" xsd:string | |||
|subset=uberon_slim;;vertebrate_core | |||
|synonym="epithelium simplex squamosum" EXACT [] | |||
|union_of= | |||
|xref=AAO:0010066;;AEO:0000070;;BILA:0000070;;BTO:0002073;;CARO:0000070;;EHDAA2:0003070;;FMA:45565;;HAO:0000070;;http://upload.wikimedia.org/wikipedia/commons/8/8f/Illu_epithelium.jpg;;ncithesaurus:Simple_Squamous_Epithelium;;TAO:0001498;;XAO:0004010;;ZFA:0001498 | |||
}} | }} | ||
Latest revision as of 17:10, 12 September 2014
| Name: | simple squamous epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium.[FMA]" [CARO:MAH, FMA:45565, Wikipedia:Simple_squamous_epithelium] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelium simplex squamosum" EXACT [] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:CARO_0000070-FMA_45565-ZFA_0001498 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000490(unilaminar epithelium),UBERON:0006914(squamous epithelium) |
|---|
Children
| is a: | UBERON:0001136 (mesothelium),UBERON:0001986 (endothelium),UBERON:0004821 (pulmonary alveolus epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10274-104E4
- 10302-104H5
- 10330-105B6
- 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
- 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
- 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11255-116F4 (Sertoli Cells, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000487 (simple squamous epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.71e-122 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_7c0e4b153533210bd4d0d7ddbb88c4a2 | p@chr18:33046982..33046991, - |
| 3.71e-122 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_7c0e4b153533210bd4d0d7ddbb88c4a2 | p@chr18:33046982..33046991, - |
| 8.56e-103 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_5d2c404de55dc76935147fbbea2327e9 | p1@MIR216A |
| 8.56e-103 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_5d2c404de55dc76935147fbbea2327e9 | p1@MIR216A |
| 5.84e-99 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_c7b596e1f4d9aa617b09f805a823e90d | p@chr6:78171774..78171792, + |
| 5.84e-99 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_c7b596e1f4d9aa617b09f805a823e90d | p@chr6:78171774..78171792, + |
| 1.04e-98 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_a14d659c50a33e712fccae90e464463e | p@chr18:33047157..33047168, - |
| 1.04e-98 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_a14d659c50a33e712fccae90e464463e | p@chr18:33047157..33047168, - |
| 1.25e-97 | FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_db903a140cc27153a80fb20293737347 | p12@PARP12 |
| 1.25e-97 | FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_db903a140cc27153a80fb20293737347 | p12@PARP12 |
| 1.84e-95 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_cb487c4f47c605dd3cb94f109c0ff8b9 | p5@PARP12 |
| 1.84e-95 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_cb487c4f47c605dd3cb94f109c0ff8b9 | p5@PARP12 |
| 5.23e-95 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_bcddc060717dda3c68b4cd557dec2c78 | p12@KSR2 |
| 5.23e-95 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_bcddc060717dda3c68b4cd557dec2c78 | p12@KSR2 |
| 1.59e-94 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_eee6bdfcf7dd7ca7a220f98e90b42a3d | p@chr3:43538305..43538325, - |
| 1.59e-94 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_eee6bdfcf7dd7ca7a220f98e90b42a3d | p@chr3:43538305..43538325, - |
| 9.39e-92 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_cb6c00d2bc8b290a9bbf4eb304eafa6d | p@chrX:71299684..71299699, + |
| 9.39e-92 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_cb6c00d2bc8b290a9bbf4eb304eafa6d | p@chrX:71299684..71299699, + |
| 1.89e-88 | FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_d97f09d851770403efc812f28cd5c4e1 | p7@WDFY4 |
| 1.89e-88 | FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_d97f09d851770403efc812f28cd5c4e1 | p7@WDFY4 |
| 2.49e-87 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_c5bfd13ea754c73fff99ede315534574 | p6@WDFY4 |
| 2.49e-87 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_c5bfd13ea754c73fff99ede315534574 | p6@WDFY4 |
| 2.7e-86 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_8fab8cd7da0f1ba47e6d09277453dbe5 | p2@BMX |
| 2.7e-86 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_8fab8cd7da0f1ba47e6d09277453dbe5 | p2@BMX |
| 1.16e-85 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_44d322b2eab5012bffa1aa23f65d6cc3 | p@chr6:3753188..3753192, - |
| 1.16e-85 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_44d322b2eab5012bffa1aa23f65d6cc3 | p@chr6:3753188..3753192, - |
| 8.49e-84 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_1c9cde7cb0dfd553e4f9063e55fffa04 | p1@ENST00000513158 |
| 8.49e-84 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_1c9cde7cb0dfd553e4f9063e55fffa04 | p1@ENST00000513158 |
| 1.29e-83 | FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_15cd29885e29b120130997644a867cc6 | p@chr10:99655692..99655725, - |
| 1.29e-83 | FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_15cd29885e29b120130997644a867cc6 | p@chr10:99655692..99655725, - |
| 1.82e-83 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_8a29eea593b75c8be5b538d2bfab57c4 | p8@GIMAP6 |
| 1.82e-83 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_8a29eea593b75c8be5b538d2bfab57c4 | p8@GIMAP6 |
| 3.1e-83 | FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_08ff02330ea7111e464bc8138a154552 | p4@EIF2B2 |
| 3.1e-83 | FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_08ff02330ea7111e464bc8138a154552 | p4@EIF2B2 |
| 8.46e-83 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_28eb17cf5926a85086c882d0d0618c29 | p@chr6:78171746..78171769, + |
| 8.46e-83 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_28eb17cf5926a85086c882d0d0618c29 | p@chr6:78171746..78171769, + |
| 1.64e-82 | FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_3e54cf02151bf76a56b8363bfc94c939 | p@chr6:148664333..148664338, - |
| 1.64e-82 | FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_3e54cf02151bf76a56b8363bfc94c939 | p@chr6:148664333..148664338, - |
| 1.09e-80 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_f8ac4469e43ddf6c7ad2b3509539e4a7 | p5@CLEC14A |
| 1.09e-80 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_f8ac4469e43ddf6c7ad2b3509539e4a7 | p5@CLEC14A |
| 2.12e-80 | FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_1790a0b01bbe31d544f76eadd77bbe04 | p15@RAI14 |
| 2.12e-80 | FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_1790a0b01bbe31d544f76eadd77bbe04 | p15@RAI14 |
| 1.14e-79 | FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_ee01f605c355881ea47ce136f33a7f61 | p15@HHIP |
| 1.14e-79 | FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_ee01f605c355881ea47ce136f33a7f61 | p15@HHIP |
| 1.31e-79 | FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_24e46c1e94051691cf1af88bc13adc69 | p@chr9:139563124..139563129, + |
| 1.31e-79 | FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_24e46c1e94051691cf1af88bc13adc69 | p@chr9:139563124..139563129, + |
| 1.36e-79 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_d4ea44077a51b2bb95674f1c0de2a35c | p5@ICAM2 |
| 1.36e-79 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_d4ea44077a51b2bb95674f1c0de2a35c | p5@ICAM2 |
| 5.67e-79 | FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_50dda7dc4e040309391014dd217cce4e | p10@NOS3 |
| 5.67e-79 | FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_50dda7dc4e040309391014dd217cce4e | p10@NOS3 |
| 1.22e-78 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_02a7bcab3b9d4d5209f329b759424b4f | p11@UIMC1 |
| 1.22e-78 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_02a7bcab3b9d4d5209f329b759424b4f | p11@UIMC1 |
| 3.05e-77 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_08ddfcd2f2b95ab8ee09372f0c976cbe | p@chr11:124761247..124761258, - |
| 3.05e-77 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_08ddfcd2f2b95ab8ee09372f0c976cbe | p@chr11:124761247..124761258, - |
| 3.28e-77 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_157cdb57666a89326f7f0dd530dc5f15 | p6@CLEC14A |
| 3.28e-77 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_157cdb57666a89326f7f0dd530dc5f15 | p6@CLEC14A |
| 3.56e-77 | FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_ab94f6a636c67d1abaf60140c143216c | p@chr1:22264210..22264241, + |
| 3.56e-77 | FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_ab94f6a636c67d1abaf60140c143216c | p@chr1:22264210..22264241, + |
| 1.5e-75 | FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_9128081f767c2ad456b518bf002aa88f | p@chr9:139543445..139543462, + |
| 1.5e-75 | FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_9128081f767c2ad456b518bf002aa88f | p@chr9:139543445..139543462, + |
| 8.15e-75 | FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_7e4a2278cff53a155fe91d90c06292e8 | p@chr9:139541134..139541139, + |
| 8.15e-75 | FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_7e4a2278cff53a155fe91d90c06292e8 | p@chr9:139541134..139541139, + |
| 8.3e-75 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_45acc26402edd60a660c2fa6da668fc6 | p@chr12:105863705..105863718, + |
| 8.3e-75 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_45acc26402edd60a660c2fa6da668fc6 | p@chr12:105863705..105863718, + |
| 1.13e-74 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_fa889ec0df4c1aee8864ade7a067ba88 | p@chr13:32835894..32835907, + |
| 1.13e-74 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_fa889ec0df4c1aee8864ade7a067ba88 | p@chr13:32835894..32835907, + |
| 4.14e-74 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_b371befad27d026f04c81949094b6e57 | p@chr19:41985048..41985050, - |
| 4.14e-74 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_b371befad27d026f04c81949094b6e57 | p@chr19:41985048..41985050, - |
| 1.41e-73 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_5c479b3586b19bea014f419f3ffccb96 | p@chr12:105863636..105863650, + |
| 1.41e-73 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_5c479b3586b19bea014f419f3ffccb96 | p@chr12:105863636..105863650, + |
| 4.24e-73 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_623804bfc68a39d4c242a966c4da7703 | p@chr9:139543390..139543404, + |
| 4.24e-73 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_623804bfc68a39d4c242a966c4da7703 | p@chr9:139543390..139543404, + |
| 6.36e-73 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_8bd3c3d1210713e3275e95fd5526fec1 | p@chr16:2220383..2220402, + |
| 6.36e-73 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_8bd3c3d1210713e3275e95fd5526fec1 | p@chr16:2220383..2220402, + |
| 3.75e-72 | FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_2077d5afc03ebd4e8e8252e0e750941a | p@chr6:11607864..11607875, + |
| 3.75e-72 | FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_2077d5afc03ebd4e8e8252e0e750941a | p@chr6:11607864..11607875, + |
| 6.16e-72 | FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_8090572f9dfbe997c7608e941cc20f45 | p14@PTPRE |
| 6.16e-72 | FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_8090572f9dfbe997c7608e941cc20f45 | p14@PTPRE |
| 1.58e-71 | FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_3fe54d653463b278d3ccf28a3c7739ea | p@chr13:32835912..32835936, + |
| 1.58e-71 | FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_3fe54d653463b278d3ccf28a3c7739ea | p@chr13:32835912..32835936, + |
| 2.22e-71 | FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_d120e3e300081e89b74d38bf6ba4a44b | p@chr12:96830523..96830532, + |
| 2.22e-71 | FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_d120e3e300081e89b74d38bf6ba4a44b | p@chr12:96830523..96830532, + |
| 2.91e-71 | FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_de8e88a5573e9714869431923f55efbe | p1@ENST00000418525 |
| 2.91e-71 | FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_de8e88a5573e9714869431923f55efbe | p1@ENST00000418525 |
| 5.12e-71 | FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_51cfc5e73c91a525474139cd00710e81 | p11@MANSC1 |
| 5.12e-71 | FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_51cfc5e73c91a525474139cd00710e81 | p11@MANSC1 |
| 6.44e-69 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_ca634778dfd888c5f422f2ae8c9256f3 | p@chr18:33047117..33047138, - |
| 6.44e-69 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_ca634778dfd888c5f422f2ae8c9256f3 | p@chr18:33047117..33047138, - |
| 7.55e-69 | FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_df4450efbd4f080c1c09e17b2a4012b9 | p@chr18:33047076..33047099, - |
| 7.55e-69 | FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_df4450efbd4f080c1c09e17b2a4012b9 | p@chr18:33047076..33047099, - |
| 9.31e-69 | FFCP PHASE2:Hg19::chr1:28785607..28785624,+#_525e7b04691dd33d2e3c6f5ec31b6696 | p@chr1:28785607..28785624, + |
| 9.31e-69 | FFCP PHASE1:Hg19::chr1:28785607..28785624,+#_525e7b04691dd33d2e3c6f5ec31b6696 | p@chr1:28785607..28785624, + |
| 1.6e-68 | FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_29f76c47e27be1bbc5b71c6129d9f03c | p@chr3:58034268..58034295, + |
| 1.6e-68 | FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_29f76c47e27be1bbc5b71c6129d9f03c | p@chr3:58034268..58034295, + |
| 3.98e-68 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_ea1d199ff815a12a758e609c40741d3d | p@chr15:39423060..39423066, + |
| 3.98e-68 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_ea1d199ff815a12a758e609c40741d3d | p@chr15:39423060..39423066, + |
| 1.56e-65 | FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_1421ee5923f34b64618bf04587e428b4 | p4@FAM124B |
| 1.56e-65 | FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_1421ee5923f34b64618bf04587e428b4 | p4@FAM124B |
| 7.31e-65 | FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_3bc9c21e1d2e77f3613eb863336ee5e1 | p4@ABI3 |
| 7.31e-65 | FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_3bc9c21e1d2e77f3613eb863336ee5e1 | p4@ABI3 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Unilaminar epithelium that consists of a single layer of squamous cells.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
