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{{UBERON
{{UBERON
|id=UBERON:0001173
|alt_id=UBERON:FMA_14665-XAO_0000455
|name=biliary tree
|namespace=
|def="Hollow tree organ, the organ parts of which consists of the bile ducts[FMA]." [FMA:14665, Wikipedia:Biliary_tract]
|xref=AAO:0011020;;FMA:14665;;GAID:279;;MA:0001273;;MESH:A.03.159;;ncithesaurus:Biliary_Tract;;SCTID:181267003;;XAO:0000455
|is_a=UBERON:0000062;;UBERON:0004119
|synonym="biliary tract" EXACT []
|comment=
|comment=
|alt_id=UBERON:FMA_14665-XAO_0000455
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Hollow tree organ, the organ parts of which consists of the bile ducts[FMA]." [FMA:14665, Wikipedia:Biliary_tract]
|subset=organ_slim;;uberon_slim
|derives_from=
|derives_from=
|develops_from=UBERON:0004912
|develops_from=UBERON:0004912
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001173
|is_a=UBERON:0004119 ;;UBERON:0013765
|is_obsolete=
|located_in=
|located_in=
|name=biliary tree
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002294
|part_of=UBERON:0002294
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Hollow tree organ, the organ parts of which consist of the bile ducts.[AAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Hollow tree organ, the organ parts of which consist of the bile ducts.[AAO]" xsd:string
|is_obsolete=
|subset=organ_slim;;uberon_slim
|preceded_by=
|synonym="biliary tract" EXACT []
|union_of=
|xref=AAO:0011020;;FMA:14665;;GAID:279;;MA:0001273;;MESH:A.03.159;;ncithesaurus:Biliary_Tract;;SCTID:181267003;;XAO:0000455
}}
}}

Latest revision as of 17:16, 12 September 2014

Name:biliary tree
Namespace:FANTOM
Definition:"Hollow tree organ, the organ parts of which consists of the bile ducts[FMA]." [FMA:14665, Wikipedia:Biliary_tract]
Xrefs:
links:

AAO:0011020
FMA:14665
GAID:279
MA:0001273
MESH:A.03.159
ncithesaurus:Biliary_Tract
SCTID:181267003

XAO:0000455
Synonyms: "biliary tract" EXACT []
Alt_id: UBERON:FMA_14665-XAO_0000455
Subset: organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004119(endoderm-derived structure),UBERON:0013765(digestive system element)
develops_from:UBERON:0004912(biliary bud)
part_of:UBERON:0002294(biliary system)



Children

part of:UBERON:0001174 (common bile duct),UBERON:0002110 (gallbladder),UBERON:0002394 (bile duct),UBERON:0005171 (hepatic duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001173 (biliary tree), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Hollow tree organ, the organ parts of which consist of the bile ducts.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.