UBERON:0001768: Difference between revisions
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(Created page with "{{UBERON
|id=UBERON:0001768
|name=vascular layer of eyeball
|namespace=
|def="pigmented middle of the three concentric layers that make up an eye[WP]. The pigmented vascul...") |
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FMA_58103-MA_0002480 | ||
|comment=TODO - check child terms, isa vs partof | |comment=TODO - check child terms, isa vs partof | ||
|created_by= | |created_by= | ||
| | |def="pigmented middle of the three concentric layers that make up an eye[WP]. The pigmented vascular coat of the eyeball, consisting of the CHOROID; CILIARY BODY; and IRIS, which are continuous with each other. (Cline et al., Dictionary of Visual Science, 4th ed)[GAID]." [Wikipedia:Uvea] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0001768 | |||
|is_a=UBERON:0002203 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=uvea | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001801 | |part_of=UBERON:0001801 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset=uberon_slim | |||
|synonym="tunica vasculosa bulbi" RELATED LATIN [Wikipedia:Uvea];;"tunica vasculosa of eyeball" EXACT [];;"uvea" EXACT [];;"uveal tract" EXACT [] | |||
|union_of= | |||
|xref=FMA:58103;;GAID:912;;http://upload.wikimedia.org/wikipedia/commons/e/eb/Gray869.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/e/eb/Gray869.png/200px-Gray869.png;;MA:0002480;;MESH:A.09.371.894;;ncithesaurus:Uvea;;SCTID:280648000 | |||
}} | }} |
Latest revision as of 17:20, 12 September 2014
Name: | uvea | |
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Namespace: | FANTOM | |
Definition: | "pigmented middle of the three concentric layers that make up an eye[WP]. The pigmented vascular coat of the eyeball, consisting of the CHOROID; CILIARY BODY; and IRIS, which are continuous with each other. (Cline et al., Dictionary of Visual Science, 4th ed)[GAID]." [Wikipedia:Uvea] | |
Xrefs: |
| |
Synonyms: |
"tunica vasculosa bulbi" RELATED LATIN [Wikipedia:Uvea] "tunica vasculosa of eyeball" EXACT [] "uvea" EXACT [] "uveal tract" EXACT [] | |
Comments: | TODO - check child terms, isa vs partof | |
Alt_id: | UBERON:FMA_58103-MA_0002480 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002203(vasculature of eye) |
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part_of: | UBERON:0001801(anterior segment of eyeball) |
Children
part of: | UBERON:0003956 (aqueous drainage system),UBERON:0011892 (anterior uvea) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11242-116D9 (Ciliary Epithelial Cells, donor1)
- 11323-117D9 (Ciliary Epithelial Cells, donor2)
- 11399-118D4 (Ciliary Epithelial Cells, donor3)
- 11530-119I9 (Iris Pigment Epithelial Cells, donor1)
- 11532-120A2 (Trabecular Meshwork Cells, donor1)
- 11610-120I8
- 11612-122A1 (Trabecular Meshwork Cells, donor2)
- 11691-122I8
- 11693-123A1 (Trabecular Meshwork Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001768 (uvea), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data