UBERON:0002417: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:MA_0000021-FMA_259211 | ||
| | |anatomical_img_id=FMA:259211 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="the abdominal segment of the torso." [Wikipedia:Lumbar] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0002417 | |||
|is_a=UBERON:0009569 ;;UBERON:0011676 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=abdominal segment of trunk | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="abdomen/pelvis/perineum" RELATED [MA:0000021];;"lower body" RELATED [MA:0000021];;"lumbar region" RELATED [UBERON:cjm] | ||
|union_of= | |||
|xref=FMA:259211;;MA:0000021 | |||
}} | }} |
Latest revision as of 17:31, 12 September 2014
Name: | abdominal segment of trunk | |
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Namespace: | FANTOM | |
Definition: | "the abdominal segment of the torso." [Wikipedia:Lumbar] | |
Xrefs: |
| |
Synonyms: |
"abdomen/pelvis/perineum" RELATED [MA:0000021] "lower body" RELATED [MA:0000021] "lumbar region" RELATED [UBERON:cjm] | |
Alt_id: | UBERON:MA_0000021-FMA_259211 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0009569(subdivision of trunk),UBERON:0011676(subdivision of organism along main body axis) |
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Children
part of: | UBERON:0000916 (abdomen),UBERON:0002355 (pelvis),UBERON:0003835 (abdominal segment blood vessel),UBERON:0003838 (abdominal segment connective tissue),UBERON:0005173 (abdominal segment element) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
... further results Mouse (Mus musculus)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002417 (abdominal segment of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data