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{{UBERON
{{UBERON
|id=UBERON:0002417
|alt_id=UBERON:MA_0000021-FMA_259211
|name=abdominal segment of trunk
|anatomical_img_id=FMA:259211
|namespace=
|def="the abdominal segment of the torso." [Wikipedia:Lumbar]
|xref=FMA:259211;;MA:0000021
|is_a=UBERON:0009569
|synonym="abdomen/pelvis/perineum" RELATED [MA:0000021];;"lower body" RELATED [MA:0000021];;"lumbar region" RELATED [UBERON:cjm]
|comment=
|comment=
|alt_id=UBERON:MA_0000021-FMA_259211
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="the abdominal segment of the torso." [Wikipedia:Lumbar]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002417
|is_a=UBERON:0009569 ;;UBERON:0011676
|is_obsolete=
|located_in=
|located_in=
|name=abdominal segment of trunk
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="abdomen/pelvis/perineum" RELATED [MA:0000021];;"lower body" RELATED [MA:0000021];;"lumbar region" RELATED [UBERON:cjm]
|union_of=
|xref=FMA:259211;;MA:0000021
}}
}}

Latest revision as of 17:31, 12 September 2014

Name:abdominal segment of trunk
Namespace:FANTOM
Definition:"the abdominal segment of the torso." [Wikipedia:Lumbar]
Xrefs:
links:

FMA:259211

MA:0000021
Synonyms: "abdomen/pelvis/perineum" RELATED [MA:0000021]
"lower body" RELATED [MA:0000021]
"lumbar region" RELATED [UBERON:cjm]
Alt_id: UBERON:MA_0000021-FMA_259211

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0009569(subdivision of trunk),UBERON:0011676(subdivision of organism along main body axis)



Children

part of:UBERON:0000916 (abdomen),UBERON:0002355 (pelvis),UBERON:0003835 (abdominal segment blood vessel),UBERON:0003838 (abdominal segment connective tissue),UBERON:0005173 (abdominal segment element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002417 (abdominal segment of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data