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UBERON:0003606: Difference between revisions

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Line 13: Line 13:
|located_in=
|located_in=
|name=limb long bone
|name=limb long bone
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0002101
|part_of=UBERON:0002101

Latest revision as of 17:40, 12 September 2014

Name:limb long bone
Namespace:FANTOM
Definition:"A long bone that is part of a limb [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000298
Synonyms: "long bone of limb" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002428(limb bone),UBERON:0002495(long bone)
part_of:UBERON:0002101(limb)



Children

is a:UBERON:0003608 (hindlimb long bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003606 (limb long bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data