UBERON:0009123: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0003069 | |develops_from=UBERON:0003069 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0009123 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=otic cup | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 18:04, 12 September 2014
| Name: | otic cup |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0003069(otic placode) |
Children
| develops from: | UBERON:0003051 (ear vesicle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009123 (otic cup), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_b1910012f17566919440def95cc5be02 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_b1910012f17566919440def95cc5be02 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_b1910012f17566919440def95cc5be02 | p10@Sec11a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_b1910012f17566919440def95cc5be02 | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_b1910012f17566919440def95cc5be02 | p4@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_b1910012f17566919440def95cc5be02 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_b1910012f17566919440def95cc5be02 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_b1910012f17566919440def95cc5be02 | p1@Grxcr1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_b1910012f17566919440def95cc5be02 | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_b1910012f17566919440def95cc5be02 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_b1910012f17566919440def95cc5be02 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_b1910012f17566919440def95cc5be02 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_b1910012f17566919440def95cc5be02 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_b1910012f17566919440def95cc5be02 | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_b1910012f17566919440def95cc5be02 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_b1910012f17566919440def95cc5be02 | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_b1910012f17566919440def95cc5be02 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_b1910012f17566919440def95cc5be02 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_b1910012f17566919440def95cc5be02 | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_b1910012f17566919440def95cc5be02 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_b1910012f17566919440def95cc5be02 | p21@Espn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_b1910012f17566919440def95cc5be02 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_b1910012f17566919440def95cc5be02 | p@chr19:10536797..10536802, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_b1910012f17566919440def95cc5be02 | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_b1910012f17566919440def95cc5be02 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_b1910012f17566919440def95cc5be02 | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_b1910012f17566919440def95cc5be02 | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_b1910012f17566919440def95cc5be02 | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_b1910012f17566919440def95cc5be02 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_b1910012f17566919440def95cc5be02 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_b1910012f17566919440def95cc5be02 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_b1910012f17566919440def95cc5be02 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_b1910012f17566919440def95cc5be02 | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_b1910012f17566919440def95cc5be02 | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_b1910012f17566919440def95cc5be02 | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_b1910012f17566919440def95cc5be02 | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_b1910012f17566919440def95cc5be02 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_b1910012f17566919440def95cc5be02 | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_b1910012f17566919440def95cc5be02 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_b1910012f17566919440def95cc5be02 | p@chr15:89215306..89215315, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_b1910012f17566919440def95cc5be02 | p3@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_b1910012f17566919440def95cc5be02 | p5@BC030867 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_b1910012f17566919440def95cc5be02 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_b1910012f17566919440def95cc5be02 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_b1910012f17566919440def95cc5be02 | p@chr3:35012425..35012439, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_b1910012f17566919440def95cc5be02 | p1@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983160..13983167, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_b1910012f17566919440def95cc5be02 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_b1910012f17566919440def95cc5be02 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_b1910012f17566919440def95cc5be02 | p1@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_b1910012f17566919440def95cc5be02 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_b1910012f17566919440def95cc5be02 | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_b1910012f17566919440def95cc5be02 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_b1910012f17566919440def95cc5be02 | p2@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_b1910012f17566919440def95cc5be02 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_b1910012f17566919440def95cc5be02 | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_b1910012f17566919440def95cc5be02 | p10@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_b1910012f17566919440def95cc5be02 | p21@Espn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_b1910012f17566919440def95cc5be02 | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_b1910012f17566919440def95cc5be02 | p2@Gm1322 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_b1910012f17566919440def95cc5be02 | p@chr14:63099970..63099980, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_b1910012f17566919440def95cc5be02 | p1@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_b1910012f17566919440def95cc5be02 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_b1910012f17566919440def95cc5be02 | p10@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_b1910012f17566919440def95cc5be02 | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_b1910012f17566919440def95cc5be02 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_b1910012f17566919440def95cc5be02 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_b1910012f17566919440def95cc5be02 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_b1910012f17566919440def95cc5be02 | p@chr14:47293487..47293493, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_b1910012f17566919440def95cc5be02 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_b1910012f17566919440def95cc5be02 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_b1910012f17566919440def95cc5be02 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_b1910012f17566919440def95cc5be02 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_b1910012f17566919440def95cc5be02 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_b1910012f17566919440def95cc5be02 | p7@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_b1910012f17566919440def95cc5be02 | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_b1910012f17566919440def95cc5be02 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_b1910012f17566919440def95cc5be02 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_b1910012f17566919440def95cc5be02 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_b1910012f17566919440def95cc5be02 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_b1910012f17566919440def95cc5be02 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_b1910012f17566919440def95cc5be02 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_b1910012f17566919440def95cc5be02 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_b1910012f17566919440def95cc5be02 | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_b1910012f17566919440def95cc5be02 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_b1910012f17566919440def95cc5be02 | p10@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_b1910012f17566919440def95cc5be02 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_b1910012f17566919440def95cc5be02 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_b1910012f17566919440def95cc5be02 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_b1910012f17566919440def95cc5be02 | p4@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_b1910012f17566919440def95cc5be02 | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_b1910012f17566919440def95cc5be02 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_b1910012f17566919440def95cc5be02 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_b1910012f17566919440def95cc5be02 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_b1910012f17566919440def95cc5be02 | p3@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_b1910012f17566919440def95cc5be02 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_b1910012f17566919440def95cc5be02 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_b1910012f17566919440def95cc5be02 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_b1910012f17566919440def95cc5be02 | p@chr5:72652660..72652667, + |
