UBERON:0009123: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from=UBERON:0003069 | |develops_from=UBERON:0003069 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0009123 | |||
|is_a=UBERON:0005423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=otic cup | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 18:04, 12 September 2014
| Name: | otic cup |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0003069(otic placode) |
Children
| develops from: | UBERON:0003051 (ear vesicle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009123 (otic cup), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_b1910012f17566919440def95cc5be02 | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_b1910012f17566919440def95cc5be02 | p9@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_b1910012f17566919440def95cc5be02 | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_b1910012f17566919440def95cc5be02 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_b1910012f17566919440def95cc5be02 | p@chr9:42207375..42207384, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_b1910012f17566919440def95cc5be02 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_b1910012f17566919440def95cc5be02 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_b1910012f17566919440def95cc5be02 | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_b1910012f17566919440def95cc5be02 | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_b1910012f17566919440def95cc5be02 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_b1910012f17566919440def95cc5be02 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_b1910012f17566919440def95cc5be02 | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_b1910012f17566919440def95cc5be02 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_b1910012f17566919440def95cc5be02 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_b1910012f17566919440def95cc5be02 | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_b1910012f17566919440def95cc5be02 | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_b1910012f17566919440def95cc5be02 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_b1910012f17566919440def95cc5be02 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_b1910012f17566919440def95cc5be02 | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_b1910012f17566919440def95cc5be02 | p@chr12:13572961..13572974, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_b1910012f17566919440def95cc5be02 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_b1910012f17566919440def95cc5be02 | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_b1910012f17566919440def95cc5be02 | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_b1910012f17566919440def95cc5be02 | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_b1910012f17566919440def95cc5be02 | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_b1910012f17566919440def95cc5be02 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_b1910012f17566919440def95cc5be02 | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_b1910012f17566919440def95cc5be02 | p2@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_b1910012f17566919440def95cc5be02 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_b1910012f17566919440def95cc5be02 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_b1910012f17566919440def95cc5be02 | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_b1910012f17566919440def95cc5be02 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_b1910012f17566919440def95cc5be02 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_b1910012f17566919440def95cc5be02 | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_b1910012f17566919440def95cc5be02 | p@chr8:13414289..13414295, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_b1910012f17566919440def95cc5be02 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_b1910012f17566919440def95cc5be02 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_b1910012f17566919440def95cc5be02 | p2@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_b1910012f17566919440def95cc5be02 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_b1910012f17566919440def95cc5be02 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_b1910012f17566919440def95cc5be02 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_b1910012f17566919440def95cc5be02 | p4@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_b1910012f17566919440def95cc5be02 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_b1910012f17566919440def95cc5be02 | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_b1910012f17566919440def95cc5be02 | p3@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_b1910012f17566919440def95cc5be02 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_b1910012f17566919440def95cc5be02 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_b1910012f17566919440def95cc5be02 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_b1910012f17566919440def95cc5be02 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_b1910012f17566919440def95cc5be02 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_b1910012f17566919440def95cc5be02 | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_b1910012f17566919440def95cc5be02 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_b1910012f17566919440def95cc5be02 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_b1910012f17566919440def95cc5be02 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_b1910012f17566919440def95cc5be02 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_b1910012f17566919440def95cc5be02 | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_b1910012f17566919440def95cc5be02 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_b1910012f17566919440def95cc5be02 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_b1910012f17566919440def95cc5be02 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_b1910012f17566919440def95cc5be02 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_b1910012f17566919440def95cc5be02 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_b1910012f17566919440def95cc5be02 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_b1910012f17566919440def95cc5be02 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_b1910012f17566919440def95cc5be02 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_b1910012f17566919440def95cc5be02 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_b1910012f17566919440def95cc5be02 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_b1910012f17566919440def95cc5be02 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_b1910012f17566919440def95cc5be02 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_b1910012f17566919440def95cc5be02 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_b1910012f17566919440def95cc5be02 | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_b1910012f17566919440def95cc5be02 | p1@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_b1910012f17566919440def95cc5be02 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_b1910012f17566919440def95cc5be02 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_b1910012f17566919440def95cc5be02 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_b1910012f17566919440def95cc5be02 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_b1910012f17566919440def95cc5be02 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_b1910012f17566919440def95cc5be02 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_b1910012f17566919440def95cc5be02 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_b1910012f17566919440def95cc5be02 | p2@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_b1910012f17566919440def95cc5be02 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_b1910012f17566919440def95cc5be02 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_b1910012f17566919440def95cc5be02 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_b1910012f17566919440def95cc5be02 | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_b1910012f17566919440def95cc5be02 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_b1910012f17566919440def95cc5be02 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_b1910012f17566919440def95cc5be02 | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_b1910012f17566919440def95cc5be02 | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_b1910012f17566919440def95cc5be02 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_b1910012f17566919440def95cc5be02 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_b1910012f17566919440def95cc5be02 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_b1910012f17566919440def95cc5be02 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_b1910012f17566919440def95cc5be02 | p@chr11:11599532..11599539, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_b1910012f17566919440def95cc5be02 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_b1910012f17566919440def95cc5be02 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_b1910012f17566919440def95cc5be02 | p4@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_b1910012f17566919440def95cc5be02 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_b1910012f17566919440def95cc5be02 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_b1910012f17566919440def95cc5be02 | p@chr3:154459246..154459253, + |
