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{{UBERON
{{UBERON
|id=UBERON:0009201
|alt_id=
|name=nephric duct
|namespace=
|def="A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
|xref=
|is_a=UBERON:0003914;;UBERON:0004819;;UBERON:0006553;;UBERON:0006555
|synonym=
|comment=pronephric duct or mesonephric duct
|comment=pronephric duct or mesonephric duct
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0009201
|is_a=UBERON:0003914 ;;UBERON:0004819 ;;UBERON:0006553
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=nephric duct
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002113
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=UBERON:0003060;;UBERON:0003074
|xref=
}}
}}

Latest revision as of 18:05, 12 September 2014

Name:nephric duct
Namespace:FANTOM
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct)
union_of:UBERON:0003060(pronephric duct),UBERON:0003074(mesonephric duct)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26688157..26688159, -
3.28e-58FFCP PHASE1:Mm9::chr5:100634942..100634968,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:100634942..100634968, +
3.28e-58FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:25678985..25679033, +
3.28e-58FFCP PHASE1:Mm9::chr12:16664775..16664784,+#_006addc8dc83332a4f4d9db9adb060d7p@chr12:16664775..16664784, +
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chrX:156829476..156829504,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:156829476..156829504, +
3.28e-58FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_006addc8dc83332a4f4d9db9adb060d7p1@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798132..75798152, -
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:59845404..59845416, -
3.28e-58FFCP PHASE1:Mm9::chr4:138824620..138824627,+#_006addc8dc83332a4f4d9db9adb060d7p@chr4:138824620..138824627, +
3.28e-58FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379125..21379144,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379125..21379144, -
3.28e-58FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_006addc8dc83332a4f4d9db9adb060d7p7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798114..75798125, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280126..50280140, +
3.28e-58FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_006addc8dc83332a4f4d9db9adb060d7p@chr19:24582739..24582748, -
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_006addc8dc83332a4f4d9db9adb060d7p5@Defb43
3.28e-58FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:127470322..127470326, +
3.28e-58FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_006addc8dc83332a4f4d9db9adb060d7p11@Arhgef40
3.28e-58FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_006addc8dc83332a4f4d9db9adb060d7p3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_006addc8dc83332a4f4d9db9adb060d7p3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_006addc8dc83332a4f4d9db9adb060d7p5@Defb43
3.28e-58FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:124447371..124447383, +
3.28e-58FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:46301295..46301302, -
3.28e-58FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:168436322..168436326, -
3.28e-58FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155697874..155697885, -
3.28e-58FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_006addc8dc83332a4f4d9db9adb060d7p11@P4ha2
3.28e-58FFCP PHASE1:Mm9::chr10:61976287..61976297,-#_006addc8dc83332a4f4d9db9adb060d7p@chr10:61976287..61976297, -
3.28e-58FFCP PHASE1:Mm9::chr8:107073888..107073914,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378871..21378901,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378871..21378901, -
3.28e-58FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_006addc8dc83332a4f4d9db9adb060d7p@chr17:35249011..35249020, -
3.28e-58FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_006addc8dc83332a4f4d9db9adb060d7p2@Defb23
3.28e-58FFCP PHASE1:Mm9::chr9:70779586..70779596,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE1:Mm9::chr9:26610184..26610191,-#_006addc8dc83332a4f4d9db9adb060d7p4@Glb1l2
3.28e-58FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_006addc8dc83332a4f4d9db9adb060d7p3@Lcn12
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221016..73221031, +
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:46041606..46041640, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:34813361..34813403, -
3.28e-58FFCP PHASE1:Mm9::chr7:75293847..75293851,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:75293847..75293851, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase10
3.28e-58FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:43230846..43230884, +
3.28e-58FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:20419453..20419476, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379477..31379481,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379477..31379481, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_006addc8dc83332a4f4d9db9adb060d7p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_006addc8dc83332a4f4d9db9adb060d7p2@Wfdc9
3.28e-58FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:33600466..33600491, -
3.28e-58FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21380670..21380678, -
3.28e-58FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:116399500..116399516, +
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_006addc8dc83332a4f4d9db9adb060d7p19@Clu
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_006addc8dc83332a4f4d9db9adb060d7p@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_006addc8dc83332a4f4d9db9adb060d7p@chr10:28772042..28772046, -
3.28e-58FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_006addc8dc83332a4f4d9db9adb060d7p3@Ido1
3.28e-58FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:65941913..65941923, -
3.28e-58FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6792
3.28e-58FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_006addc8dc83332a4f4d9db9adb060d7p3@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379261..21379264, -
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_006addc8dc83332a4f4d9db9adb060d7p21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_006addc8dc83332a4f4d9db9adb060d7p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:100350777..100350782, +
3.28e-58FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:75866210..75866235, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379065..21379072, -
3.28e-58FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:126591032..126591039, +

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