UBERON:0010885: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 12: | Line 12: | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=hindlimb | |name=hindlimb cartilage element | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002103;;UBERON:0001441;;UBERON:0002103 | |part_of=UBERON:0002103;;UBERON:0001441;;UBERON:0002103 | ||
Latest revision as of 18:10, 12 September 2014
| Name: | hindlimb cartilage element |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0007844(cartilage element),UBERON:0015022(hindlimb endochondral element) |
|---|---|
| develops_from: | UBERON:0010886(hindlimb bone pre-cartilage condensation) |
| part_of: | UBERON:0002103(hindlimb),UBERON:0001441(hindlimb skeleton),UBERON:0002103(hindlimb) |
Children
| is a: | UBERON:0010129 (femur cartilage element) |
|---|---|
| develops from: | UBERON:0003464 (hindlimb bone) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010885 (hindlimb cartilage element), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.4e-49 | FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_73670003b64a6702f1540c5a9683219e | p26@Myo18a |
| 3.4e-49 | FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_73670003b64a6702f1540c5a9683219e | p26@Myo18a |
| 4.96e-49 | FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_d3c19d49c1c9558458de07c9e4477279 | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_d3c19d49c1c9558458de07c9e4477279 | p@chr9:21934585..21934591, - |
| 4.96e-49 | FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_d3c19d49c1c9558458de07c9e4477279 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_d3c19d49c1c9558458de07c9e4477279 | p@chr2:32482372..32482381, + |
| 4.96e-49 | FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_d3c19d49c1c9558458de07c9e4477279 | p@chr8:75097542..75097549, + |
| 4.96e-49 | FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_d3c19d49c1c9558458de07c9e4477279 | p@chr9:21934585..21934591, - |
| 3.15e-44 | FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_d8f0ef198d6fdf3ed03b711ef8640e18 | p@chr6:51525810..51525817, + |
| 3.15e-44 | FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_d8f0ef198d6fdf3ed03b711ef8640e18 | p@chr6:51525810..51525817, + |
| 9.78e-40 | FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_eef28f49b75a7d78c54e8b2cdffff8b5 | p@chr19:4876870..4876880, - |
| 9.78e-40 | FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_eef28f49b75a7d78c54e8b2cdffff8b5 | p@chr19:4876870..4876880, - |
| 1.15e-39 | FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr1:174140324..174140335, - |
| 1.15e-39 | FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr6:4490674..4490679, + |
| 1.15e-39 | FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr11:67063327..67063335, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr16:24096441..24096449, + |
| 1.15e-39 | FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_e326a4b4d8e48b34d4ad30dd50f33d40 | p@chr1:174140324..174140335, - |
| 1.55e-39 | FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_1a7fc45218e70192512fe21ccd12cebe | p@chr1:174143249..174143260, - |
| 1.55e-39 | FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_1a7fc45218e70192512fe21ccd12cebe | p@chr1:174143249..174143260, - |
| 3.03e-39 | FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_b78e331dbdd63ff9cd9277c9454b125d | p@chr6:51525869..51525891, + |
| 3.03e-39 | FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_b78e331dbdd63ff9cd9277c9454b125d | p@chr6:51525869..51525891, + |
| 9.31e-39 | FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_5873085c8857ee7c2c2fed4ab92d4512 | p3@Asb16 |
| 9.31e-39 | FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_5873085c8857ee7c2c2fed4ab92d4512 | p3@Asb16 |
| 2.41e-35 | FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_caa1ed3cc2a4e3b70eb77f18124a78a4 | p@chr7:133604286..133604297, - |
| 2.41e-35 | FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_caa1ed3cc2a4e3b70eb77f18124a78a4 | p@chr7:133604286..133604297, - |
| 2.95e-35 | FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_fb4c054991082fc0816d69a9664d3ccb | p5@Pla2g5 |
| 2.95e-35 | FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_fb4c054991082fc0816d69a9664d3ccb | p5@Pla2g5 |
| 9.53e-34 | FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_55f26b50963e685f2aa8c2647cb620d5 | p2@uc009mdq.1 |
| 9.53e-34 | FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_55f26b50963e685f2aa8c2647cb620d5 | p2@uc009mdq.1 |
| 1.23e-33 | FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_6c811e01ecb06b2d5ead07bd45c21fc3 | p3@Mmp9 |
| 1.23e-33 | FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_6c811e01ecb06b2d5ead07bd45c21fc3 | p3@Mmp9 |
| 1.58e-33 | FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_300ee2f5b822101d428f4bdeea7491b0 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_300ee2f5b822101d428f4bdeea7491b0 | p2@Oscar |
| 1.58e-33 | FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_300ee2f5b822101d428f4bdeea7491b0 | p@chr1:166815111..166815121, - |
| 1.58e-33 | FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_300ee2f5b822101d428f4bdeea7491b0 | p@chr1:166815111..166815121, - |
| 2.04e-33 | FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_c6f610bcae7f46e0289f7c667d938718 | p@chr11:75409652..75409664, + |
| 2.04e-33 | FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_c6f610bcae7f46e0289f7c667d938718 | p4@Lipc |
| 2.04e-33 | FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_c6f610bcae7f46e0289f7c667d938718 | p4@Lipc |
| 2.04e-33 | FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_c6f610bcae7f46e0289f7c667d938718 | p@chr11:75409652..75409664, + |
| 3.38e-33 | FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_640b827d0b39945868df11f45b5a8111 | p6@Sp7 |
| 3.38e-33 | FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_640b827d0b39945868df11f45b5a8111 | p6@Sp7 |
| 7.17e-33 | FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_535ddf6fe1172da80ab760e43ae7cdad | p@chr18:76271498..76271508, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_535ddf6fe1172da80ab760e43ae7cdad | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_535ddf6fe1172da80ab760e43ae7cdad | p@chr8:126415826..126415839, + |
| 7.17e-33 | FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_535ddf6fe1172da80ab760e43ae7cdad | p@chr18:76271498..76271508, + |
| 2.67e-30 | FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_0bae85d0944751a6be86bee22092900e | p@chr2:32482387..32482399, + |
| 2.67e-30 | FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_0bae85d0944751a6be86bee22092900e | p@chr2:32482387..32482399, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_45666cb475b113dfccca916041b8fbc5 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_45666cb475b113dfccca916041b8fbc5 | p@chr12:70396969..70396979, + |
| 1.1e-29 | FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_45666cb475b113dfccca916041b8fbc5 | p@chr15:58649683..58649688, - |
| 1.1e-29 | FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_45666cb475b113dfccca916041b8fbc5 | p@chr15:58649683..58649688, - |
| 1.46e-29 | FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_e4cb08c899cd15c7ccfd63d0cd281618 | p@chr7:133590998..133591009, - |
| 1.46e-29 | FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_e4cb08c899cd15c7ccfd63d0cd281618 | p@chr7:133590998..133591009, - |
| 1.73e-29 | FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_4c12707f9b90e837565429ce17453081 | p2@Myoz3 |
| 1.73e-29 | FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_4c12707f9b90e837565429ce17453081 | p2@Myoz3 |
| 2.42e-29 | FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_0c9f3a99f6cb16673f3eaaf9db2b7b40 | p2@Myh4 |
| 2.42e-29 | FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_0c9f3a99f6cb16673f3eaaf9db2b7b40 | p2@Myh4 |
| 7.46e-29 | FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_2fe84e82c42fc8a05813b6fb52fc74bc | p@chr1:57155729..57155740, - |
| 7.46e-29 | FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_2fe84e82c42fc8a05813b6fb52fc74bc | p@chr1:57155729..57155740, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_2a09caf56322cfd13ce53b2754a09b2a | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_2a09caf56322cfd13ce53b2754a09b2a | p1@Msmp |
| 9.26e-29 | FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_2a09caf56322cfd13ce53b2754a09b2a | p@chr11:67056544..67056589, - |
| 9.26e-29 | FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_2a09caf56322cfd13ce53b2754a09b2a | p1@Msmp |
| 1.15e-28 | FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_33704a514471d9d4bf8b031b8a7fae5a | p@chrY:2858251..2858257, + |
| 1.15e-28 | FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_33704a514471d9d4bf8b031b8a7fae5a | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_33704a514471d9d4bf8b031b8a7fae5a | p@chr6:90552017..90552024, + |
| 1.15e-28 | FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_33704a514471d9d4bf8b031b8a7fae5a | p@chrY:2858251..2858257, + |
| 1.43e-28 | FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_7375960d32656e9b07087e1057ad08f0 | p@chr6:34436258..34436292, + |
| 1.43e-28 | FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_7375960d32656e9b07087e1057ad08f0 | p@chr6:34436258..34436292, + |
| 2.2e-28 | FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_d1b623f2172f8db90a87f0ca9f5785d9 | p@chr11:67069796..67069817, - |
| 2.2e-28 | FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_d1b623f2172f8db90a87f0ca9f5785d9 | p@chr11:67069796..67069817, - |
| 2.72e-28 | FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_6d77f923a1d89f2351b986ea2dca2bf0 | p@chr8:107702369..107702386, + |
| 2.72e-28 | FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_6d77f923a1d89f2351b986ea2dca2bf0 | p@chr8:107702369..107702386, + |
| 3.45e-28 | FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_061214b2ea5f84a1bbc1737f784882ef | p1@Siglec15 |
| 3.45e-28 | FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_061214b2ea5f84a1bbc1737f784882ef | p1@Siglec15 |
| 6.5e-28 | FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_a1308cfeab2c129e5d7c776caf64f643 | p6@Atp2a1 |
| 6.5e-28 | FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_a1308cfeab2c129e5d7c776caf64f643 | p6@Atp2a1 |
| 8.9e-28 | FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_94e7df005eb7ec31de0aae75f34daf81 | p7@Atp2a1 |
| 8.9e-28 | FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_94e7df005eb7ec31de0aae75f34daf81 | p7@Atp2a1 |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_968202a704afafccc53da3e2327a5ccf | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_968202a704afafccc53da3e2327a5ccf | p@chr7:133600635..133600663, + |
| 1.42e-27 | FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_968202a704afafccc53da3e2327a5ccf | p@chr7:133592162..133592188, - |
| 1.42e-27 | FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_968202a704afafccc53da3e2327a5ccf | p@chr7:133592162..133592188, - |
| 6.75e-27 | FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_805857c2407129e05222ca1ea66a0e53 | p4@Sgca |
| 6.75e-27 | FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_805857c2407129e05222ca1ea66a0e53 | p4@Sgca |
| 1.66e-26 | FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_26039d6921a1311f1c9056e4bea8a3be | p1@Mepe |
| 1.66e-26 | FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_26039d6921a1311f1c9056e4bea8a3be | p1@Mepe |
| 3.47e-26 | FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_eba29a3ab22f36bff8a1d1add5d339ed | p2@Tm4sf19 |
| 3.47e-26 | FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_eba29a3ab22f36bff8a1d1add5d339ed | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_eba29a3ab22f36bff8a1d1add5d339ed | p@chr12:81581216..81581231, + |
| 3.47e-26 | FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_eba29a3ab22f36bff8a1d1add5d339ed | p2@Tm4sf19 |
| 1.12e-25 | FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_49fd61f453aed161c9ccc3ad8a0efe8e | p5@Col11a2 |
| 1.12e-25 | FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_49fd61f453aed161c9ccc3ad8a0efe8e | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_49fd61f453aed161c9ccc3ad8a0efe8e | p@chr15:97806574..97806585, - |
| 1.12e-25 | FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_49fd61f453aed161c9ccc3ad8a0efe8e | p5@Col11a2 |
| 1.36e-25 | FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_f2bad890515f5b749030189ec476780d | p@chr2:180890942..180890956, - |
| 1.36e-25 | FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_f2bad890515f5b749030189ec476780d | p2@Siglec15 |
