FFCP PHASE1:Hg19::chr10:103269326..103269330,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:103269326..103269330,+
|short_description=p@chr10:103269326..103269330,+
|description=CAGE_peak_at_chr10:103269326..103269330,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:103269326..103269330,+ | |||
|description=CAGE_peak_at_chr10:103269326..103269330,+ | |||
|id=chr10:103269326..103269330,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.13e-09;2!CL:0000558;9.13e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.86e-08,2;CL:0000765,1.86e-08,2;CL:0000050,1.86e-08,2;CL:0000038,1.86e-08,2;CL:0000558,1.86e-08,2;CL:0000547,1.86e-08,2;CL:0000549,1.86e-08,2;CL:0000550,1.86e-08,2;CL:0000552,1.86e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-14!115;UBERON:0001049!2.74e-10!57;UBERON:0005068!2.74e-10!57;UBERON:0006241!2.74e-10!57;UBERON:0007135!2.74e-10!57;UBERON:0001017!2.93e-10!82;UBERON:0000955!4.53e-10!69;UBERON:0006238!4.53e-10!69;UBERON:0002346!8.98e-10!90;UBERON:0005743!1.23e-09!86;UBERON:0002616!2.38e-09!59;UBERON:0000073!2.49e-09!94;UBERON:0001016!2.49e-09!94;UBERON:0003075!1.73e-08!86;UBERON:0007284!1.73e-08!86;UBERON:0003080!1.39e-07!42;UBERON:0000153!3.81e-07!129;UBERON:0007811!3.81e-07!129;UBERON:0002780!4.50e-07!41;UBERON:0001890!4.50e-07!41;UBERON:0006240!4.50e-07!41;UBERON:0001893!9.34e-07!34;UBERON:0002020!9.51e-07!34;UBERON:0003528!9.51e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.22e-09;32!UBERON:0000922;3.04e-09;49!UBERON:0002780;1.93e-08;41!UBERON:0001890;1.93e-08;41!UBERON:0003528;2.35e-08;34!UBERON:0002020;2.35e-08;34!UBERON:0002619;7.49e-08;22!UBERON:0002021;8.59e-08;5!UBERON:0001869;8.87e-08;32!UBERON:0000073;1.11e-07;53!UBERON:0002616;1.11e-07;53!UBERON:0000125;3.02e-07;9!UBERON:0002308;3.02e-07;9!UBERON:0001893;4.45e-07;34!UBERON:0000956;7.86e-07;25!UBERON:0000203;7.86e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.40e-13,86;UBERON:0001049,2.32e-12,56;UBERON:0005068,2.32e-12,56;UBERON:0006241,2.32e-12,56;UBERON:0007135,2.32e-12,56;UBERON:0003528,7.55e-12,34;UBERON:0002020,7.55e-12,34;UBERON:0001017,1.83e-11,81;UBERON:0000073,1.87e-11,53;UBERON:0002616,1.87e-11,53;UBERON:0007023,2.60e-11,114;UBERON:0003075,3.34e-11,82;UBERON:0007284,3.34e-11,82;UBERON:0000955,4.99e-11,68;UBERON:0006238,4.99e-11,68;UBERON:0002791,1.68e-10,32;UBERON:0001016,6.16e-10,89;UBERON:0001893,8.66e-10,34;UBERON:0002780,1.57e-09,41;UBERON:0001890,1.57e-09,41;UBERON:0003080,1.57e-09,41;UBERON:0006240,1.57e-09,41;UBERON:0001869,1.62e-08,32;UBERON:0010371,5.15e-08,104;UBERON:0002619,6.45e-08,22;UBERON:0002021,8.54e-08,5;UBERON:0000125,3.19e-07,9;UBERON:0002308,3.19e-07,9;UBERON:0003056,6.72e-07,61;UBERON:0000956,6.90e-07,25;UBERON:0000203,6.90e-07,25 | |||
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| ||
|short_description=p@chr10:103269326..103269330,+ | |||
}} | }} |
Latest revision as of 09:39, 23 July 2015
Short description: | p@chr10:103269326..103269330, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:103269326..103269330, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.86e-08 | 2 |
erythroblast | 1.86e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.86e-08 | 2 |
erythroid progenitor cell | 1.86e-08 | 2 |
reticulocyte | 1.86e-08 | 2 |
proerythroblast | 1.86e-08 | 2 |
basophilic erythroblast | 1.86e-08 | 2 |
polychromatophilic erythroblast | 1.86e-08 | 2 |
orthochromatic erythroblast | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.40e-13 | 86 |
neural tube | 2.32e-12 | 56 |
neural rod | 2.32e-12 | 56 |
future spinal cord | 2.32e-12 | 56 |
neural keel | 2.32e-12 | 56 |
brain grey matter | 7.55e-12 | 34 |
gray matter | 7.55e-12 | 34 |
central nervous system | 1.83e-11 | 81 |
regional part of nervous system | 1.87e-11 | 53 |
regional part of brain | 1.87e-11 | 53 |
adult organism | 2.60e-11 | 114 |
neural plate | 3.34e-11 | 82 |
presumptive neural plate | 3.34e-11 | 82 |
brain | 4.99e-11 | 68 |
future brain | 4.99e-11 | 68 |
regional part of telencephalon | 1.68e-10 | 32 |
nervous system | 6.16e-10 | 89 |
telencephalon | 8.66e-10 | 34 |
regional part of forebrain | 1.57e-09 | 41 |
forebrain | 1.57e-09 | 41 |
anterior neural tube | 1.57e-09 | 41 |
future forebrain | 1.57e-09 | 41 |
cerebral hemisphere | 1.62e-08 | 32 |
ecto-epithelium | 5.15e-08 | 104 |
regional part of cerebral cortex | 6.45e-08 | 22 |
occipital lobe | 8.54e-08 | 5 |
neural nucleus | 3.19e-07 | 9 |
nucleus of brain | 3.19e-07 | 9 |
pre-chordal neural plate | 6.72e-07 | 61 |
cerebral cortex | 6.90e-07 | 25 |
pallium | 6.90e-07 | 25 |