FFCP PHASE1:Hg19::chr10:103269326..103269330,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:103269326..103269330,+ | |||
|description=CAGE_peak_at_chr10:103269326..103269330,+ | |description=CAGE_peak_at_chr10:103269326..103269330,+ | ||
|id=chr10:103269326..103269330,+ | |id=chr10:103269326..103269330,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;9.13e-09;2!CL:0000558;9.13e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.86e-08,2;CL:0000765,1.86e-08,2;CL:0000050,1.86e-08,2;CL:0000038,1.86e-08,2;CL:0000558,1.86e-08,2;CL:0000547,1.86e-08,2;CL:0000549,1.86e-08,2;CL:0000550,1.86e-08,2;CL:0000552,1.86e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-14!115;UBERON:0001049!2.74e-10!57;UBERON:0005068!2.74e-10!57;UBERON:0006241!2.74e-10!57;UBERON:0007135!2.74e-10!57;UBERON:0001017!2.93e-10!82;UBERON:0000955!4.53e-10!69;UBERON:0006238!4.53e-10!69;UBERON:0002346!8.98e-10!90;UBERON:0005743!1.23e-09!86;UBERON:0002616!2.38e-09!59;UBERON:0000073!2.49e-09!94;UBERON:0001016!2.49e-09!94;UBERON:0003075!1.73e-08!86;UBERON:0007284!1.73e-08!86;UBERON:0003080!1.39e-07!42;UBERON:0000153!3.81e-07!129;UBERON:0007811!3.81e-07!129;UBERON:0002780!4.50e-07!41;UBERON:0001890!4.50e-07!41;UBERON:0006240!4.50e-07!41;UBERON:0001893!9.34e-07!34;UBERON:0002020!9.51e-07!34;UBERON:0003528!9.51e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.22e-09;32!UBERON:0000922;3.04e-09;49!UBERON:0002780;1.93e-08;41!UBERON:0001890;1.93e-08;41!UBERON:0003528;2.35e-08;34!UBERON:0002020;2.35e-08;34!UBERON:0002619;7.49e-08;22!UBERON:0002021;8.59e-08;5!UBERON:0001869;8.87e-08;32!UBERON:0000073;1.11e-07;53!UBERON:0002616;1.11e-07;53!UBERON:0000125;3.02e-07;9!UBERON:0002308;3.02e-07;9!UBERON:0001893;4.45e-07;34!UBERON:0000956;7.86e-07;25!UBERON:0000203;7.86e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.40e-13,86;UBERON:0001049,2.32e-12,56;UBERON:0005068,2.32e-12,56;UBERON:0006241,2.32e-12,56;UBERON:0007135,2.32e-12,56;UBERON:0003528,7.55e-12,34;UBERON:0002020,7.55e-12,34;UBERON:0001017,1.83e-11,81;UBERON:0000073,1.87e-11,53;UBERON:0002616,1.87e-11,53;UBERON:0007023,2.60e-11,114;UBERON:0003075,3.34e-11,82;UBERON:0007284,3.34e-11,82;UBERON:0000955,4.99e-11,68;UBERON:0006238,4.99e-11,68;UBERON:0002791,1.68e-10,32;UBERON:0001016,6.16e-10,89;UBERON:0001893,8.66e-10,34;UBERON:0002780,1.57e-09,41;UBERON:0001890,1.57e-09,41;UBERON:0003080,1.57e-09,41;UBERON:0006240,1.57e-09,41;UBERON:0001869,1.62e-08,32;UBERON:0010371,5.15e-08,104;UBERON:0002619,6.45e-08,22;UBERON:0002021,8.54e-08,5;UBERON:0000125,3.19e-07,9;UBERON:0002308,3.19e-07,9;UBERON:0003056,6.72e-07,61;UBERON:0000956,6.90e-07,25;UBERON:0000203,6.90e-07,25 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.376627918784408,0.305653622991805,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.568676929949686,0,0.553995408531877,0,0,0.223915474239924,0.647787332037959,0,0.290796477559129,0,0.485168122375632,0.697287110717054,0.411167888021826,0.619412741790207,0.28769239232215,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0.574752439954483,0,1.90810750907073,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0.328875809207352,0.552700035571697,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0.886917589850256,0,0.0654895377488563,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0,0.367663080345869,0,0.17859945656816,0.44905874525234,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0.485618833104395,0.140450806702248,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0.843881661206331,0.0974370051611986,0,0,0,0.710019185033229,0.302256294682921,0,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.463721619900307,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0.414656231081544,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,1.64381058040307,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0,0,4.46557126157214,0,2.99161459204025,0,0,0,0,0.623912584592421,0.356857977594324,0.788512075169673,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.482561763430822,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0.364182336013434,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,1.09629938322967,1.3071772551245,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.275673144969061,0.644521469209642,0.290033387828457,0,0.178064071293475,0,0,1.27612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31717957183961,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,0.490080431962063,0.371606350251437,0,0.426851060090485,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0.912938716132769,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0.557216921387392,0,0.23874448473769,0,0,0,0.984685914873589,0,0.659215496907038,2.11125408127993,0.796991953004279,1.10513566212459,0.503865495708552,0.306806047506464,0,0,0.359473404589307,0.179021174675609,0,0,2.3948309234694,0,1.93866549219044,0.0927680981618513,1.99613798001194,0.260427761085233,0.174919999992391,1.44999915086959,0.1137934482855,0,0.236387681767936,0,0,0.520874984799877,0,1.32656082487949,0,0.884634079449797,1.47773809476774,0,0.32681539055697,0.139423744278603,0.461701551022782,0.227884111694002,0.46112780877612,0.0897576444097721,0.760531603454056,0,0,0,0,0.470940769185074,0,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0.296521128680622,0.247127877893006,0.313265848516366,0.67401132980677,1.60515529459758,0.234264445725339,0.364909578431332,0,0,0.394584402849391,4.83962864194656,0.61214552326098,0.31593289814244,0.300646838828985,0,0,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0,0.174118413160805,0.34945333648406,0.171986032471617,0.290268993867255,0.219267951258557,0.164230914106418,0,0.529536760149002,0.225980740780532,0.137041924646751,0.19871461170299,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0,0.343609788497747,0.171594997861965,0.288109595976299,0.124252535565433,0,0.407712618220842,0.209205692624666,0,0,0,2.0535806833799,0,0,0,1.11712960508902,1.3749625440701,0,0.199679000498991,0.858452096273142,0.446342914883745,0.335917362433631,0.720599767084807,1.16495949527454,0.0787831823072236,0,0.202210631562555,0.0984274815147488,0.0846733320657845,0.795229689809303,2.17925449778521,0.1607531484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| ||
|short_description=p@chr10:103269326..103269330,+ | |short_description=p@chr10:103269326..103269330,+ | ||
}} | }} |
Latest revision as of 09:39, 23 July 2015
Short description: | p@chr10:103269326..103269330, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:103269326..103269330, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.86e-08 | 2 |
erythroblast | 1.86e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 1.86e-08 | 2 |
erythroid progenitor cell | 1.86e-08 | 2 |
reticulocyte | 1.86e-08 | 2 |
proerythroblast | 1.86e-08 | 2 |
basophilic erythroblast | 1.86e-08 | 2 |
polychromatophilic erythroblast | 1.86e-08 | 2 |
orthochromatic erythroblast | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.40e-13 | 86 |
neural tube | 2.32e-12 | 56 |
neural rod | 2.32e-12 | 56 |
future spinal cord | 2.32e-12 | 56 |
neural keel | 2.32e-12 | 56 |
brain grey matter | 7.55e-12 | 34 |
gray matter | 7.55e-12 | 34 |
central nervous system | 1.83e-11 | 81 |
regional part of nervous system | 1.87e-11 | 53 |
regional part of brain | 1.87e-11 | 53 |
adult organism | 2.60e-11 | 114 |
neural plate | 3.34e-11 | 82 |
presumptive neural plate | 3.34e-11 | 82 |
brain | 4.99e-11 | 68 |
future brain | 4.99e-11 | 68 |
regional part of telencephalon | 1.68e-10 | 32 |
nervous system | 6.16e-10 | 89 |
telencephalon | 8.66e-10 | 34 |
regional part of forebrain | 1.57e-09 | 41 |
forebrain | 1.57e-09 | 41 |
anterior neural tube | 1.57e-09 | 41 |
future forebrain | 1.57e-09 | 41 |
cerebral hemisphere | 1.62e-08 | 32 |
ecto-epithelium | 5.15e-08 | 104 |
regional part of cerebral cortex | 6.45e-08 | 22 |
occipital lobe | 8.54e-08 | 5 |
neural nucleus | 3.19e-07 | 9 |
nucleus of brain | 3.19e-07 | 9 |
pre-chordal neural plate | 6.72e-07 | 61 |
cerebral cortex | 6.90e-07 | 25 |
pallium | 6.90e-07 | 25 |