FFCP PHASE1:Hg19::chr10:108096770..108096784,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:108096770..108096784,- | |||
|coexpression_cluster_id=C674 | |||
|description=CAGE_peak_at_chr10:108096770..108096784,- | |description=CAGE_peak_at_chr10:108096770..108096784,- | ||
|id=chr10:108096770..108096784,- | |id=chr10:108096770..108096784,- | ||
|ontology_enrichment_celltype=CL:0000864!5.75e-09!1;CL:0000091!5.75e-09!1 | |ontology_enrichment_celltype=CL:0000864!5.75e-09!1;CL:0000091!5.75e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.19e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.19e-22;29 | |||
|ontology_enrichment_disease=DOID:0050687!2.58e-14!143;DOID:162!4.77e-12!235;DOID:14566!1.02e-11!239;DOID:305!5.04e-10!106;DOID:0060085!5.31e-09!1;DOID:3165!5.31e-09!1;DOID:0060121!5.31e-09!1;DOID:2438!5.31e-09!1;DOID:4418!5.31e-09!1;DOID:3571!5.75e-09!1;DOID:4960!6.22e-09!1;DOID:0070004!6.22e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4231;2.48e-10;2!DOID:3493;2.48e-10;2!DOID:1907;2.48e-10;2!DOID:1115;8.52e-09;20 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.19e-12,143;DOID:3493,1.89e-10,2;DOID:4231,2.07e-10,2;DOID:1907,2.07e-10,2;DOID:1115,7.87e-09,20;DOID:305,5.21e-08,106;DOID:162,5.63e-07,235;DOID:14566,8.17e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.37e-69!9;UBERON:0001557!3.94e-32!19;UBERON:0008947!2.12e-15!38;UBERON:0003258!2.12e-15!38;UBERON:0000072!1.74e-12!46;UBERON:0000065!1.18e-10!53;UBERON:0001041!2.35e-09!98;UBERON:0001004!3.15e-09!72;UBERON:0001007!2.04e-08!155;UBERON:0001555!2.04e-08!155;UBERON:0007026!2.04e-08!155;UBERON:0000077!8.96e-08!130;UBERON:0004921!8.96e-08!129;UBERON:0004185!8.96e-08!129;UBERON:0004119!1.69e-07!169;UBERON:0000925!1.69e-07!169;UBERON:0006595!1.69e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.21e-71;9!UBERON:0001557;2.21e-71;9!UBERON:0000072;7.02e-17;37!UBERON:0000065;1.17e-12;44!UBERON:0001004;1.15e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.83e-71,9;UBERON:0001557,7.59e-34,19;UBERON:0008947,6.30e-17,38;UBERON:0003258,6.30e-17,38;UBERON:0000072,1.14e-13,47;UBERON:0000065,6.97e-12,54;UBERON:0001041,7.64e-10,87;UBERON:0001004,1.26e-08,74;UBERON:0004921,4.34e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53798840051797,1.51726221070292,1.68707720918437,1.32352767278873,0.871517776369625,0.71181185733329,1.48314438976181,0.784885860501384,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,10.2619258029723,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,1.64450309576101,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0,1.10406443001755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66855397145913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53798840051797,1.51726221070292,1.68707720918437,1.32352767278873,0.871517776369625,0.71181185733329,1.48314438976181,0.784885860501384,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,10.2619258029723,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,1.64450309576101,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0,1.10406443001755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66855397145913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:108096770..108096784,- | |short_description=p@chr10:108096770..108096784,- | ||
}} | }} |
Latest revision as of 10:11, 23 July 2015
Short description: | p@chr10:108096770..108096784, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:108096770..108096784, - |
Coexpression cluster: | C674_endometrial_cord_ductal_synovial_adrenal_B_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.83e-71 | 9 |
upper respiratory tract | 7.59e-34 | 19 |
respiratory primordium | 6.30e-17 | 38 |
endoderm of foregut | 6.30e-17 | 38 |
segment of respiratory tract | 1.14e-13 | 47 |
respiratory tract | 6.97e-12 | 54 |
foregut | 7.64e-10 | 87 |
respiratory system | 1.26e-08 | 74 |
subdivision of digestive tract | 4.34e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.19e-12 | 143 |
signet ring cell adenocarcinoma | 1.89e-10 | 2 |
histiocytoma | 2.07e-10 | 2 |
malignant fibroxanthoma | 2.07e-10 | 2 |
sarcoma | 7.87e-09 | 20 |
carcinoma | 5.21e-08 | 106 |
cancer | 5.63e-07 | 235 |
disease of cellular proliferation | 8.17e-07 | 239 |