FFCP PHASE1:Hg19::chr10:124432364..124432367,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:124432364..124432367,+ | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_at_chr10:124432364..124432367,+ | |description=CAGE_peak_at_chr10:124432364..124432367,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.43e-11;7!CL:0000586;9.43e-11;7 | |ontology_enrichment_celltype_v019=CL:0000039;9.43e-11;7!CL:0000586;9.43e-11;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.89e-11,7;CL:0000586,9.89e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | ||
|ontology_enrichment_disease=DOID:3112!1.54e-15!1 | |ontology_enrichment_disease=DOID:3112!1.54e-15!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.03e-32!11;UBERON:0006947!2.05e-20!3;UBERON:0004054!2.05e-20!3;UBERON:0000473!9.19e-17!8;UBERON:0003101!2.06e-16!22;UBERON:0000079!2.06e-16!22;UBERON:0001301!5.56e-16!1;UBERON:0001000!6.44e-16!1;UBERON:0005352!6.44e-16!1;UBERON:0005904!1.44e-15!4;UBERON:0002370!4.55e-15!4;UBERON:0005058!4.55e-15!4;UBERON:0009113!4.55e-15!4;UBERON:0003295!4.55e-15!4;UBERON:0005562!4.55e-15!4;UBERON:0009722!3.51e-12!11;UBERON:0007690!3.51e-12!11;UBERON:0003351!2.29e-10!6;UBERON:0008814!4.36e-09!15;UBERON:0004177!5.16e-09!7;UBERON:0003133!1.66e-07!48;UBERON:0000991!9.87e-07!21;UBERON:0009196!9.87e-07!21;UBERON:0009117!9.87e-07!21;UBERON:0005564!9.87e-07!21 | |ontology_enrichment_uberon=UBERON:0003135!1.03e-32!11;UBERON:0006947!2.05e-20!3;UBERON:0004054!2.05e-20!3;UBERON:0000473!9.19e-17!8;UBERON:0003101!2.06e-16!22;UBERON:0000079!2.06e-16!22;UBERON:0001301!5.56e-16!1;UBERON:0001000!6.44e-16!1;UBERON:0005352!6.44e-16!1;UBERON:0005904!1.44e-15!4;UBERON:0002370!4.55e-15!4;UBERON:0005058!4.55e-15!4;UBERON:0009113!4.55e-15!4;UBERON:0003295!4.55e-15!4;UBERON:0005562!4.55e-15!4;UBERON:0009722!3.51e-12!11;UBERON:0007690!3.51e-12!11;UBERON:0003351!2.29e-10!6;UBERON:0008814!4.36e-09!15;UBERON:0004177!5.16e-09!7;UBERON:0003133!1.66e-07!48;UBERON:0000991!9.87e-07!21;UBERON:0009196!9.87e-07!21;UBERON:0009117!9.87e-07!21;UBERON:0005564!9.87e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.79e-88;3!UBERON:0004054;7.79e-88;3!UBERON:0001301;1.23e-66;1!UBERON:0005904;2.83e-66;4!UBERON:0001000;3.34e-66;1!UBERON:0005352;3.34e-66;1!UBERON:0003135;2.16e-54;11!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0000058;2.22e-27;10!UBERON:0004175;1.05e-13;21!UBERON:0000473;1.41e-09;8!UBERON:0003133;2.06e-08;44 | |ontology_enrichment_uberon_v019=UBERON:0006947;7.79e-88;3!UBERON:0004054;7.79e-88;3!UBERON:0001301;1.23e-66;1!UBERON:0005904;2.83e-66;4!UBERON:0001000;3.34e-66;1!UBERON:0005352;3.34e-66;1!UBERON:0003135;2.16e-54;11!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0000058;2.22e-27;10!UBERON:0004175;1.05e-13;21!UBERON:0000473;1.41e-09;8!UBERON:0003133;2.06e-08;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0001301,1.23e-66,1;UBERON:0001000,2.39e-66,1;UBERON:0005352,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0003135,2.16e-54,11;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0000058,4.91e-15,19;UBERON:0003133,2.00e-13,48;UBERON:0004175,1.03e-11,25;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0005103,1.24e-09,8;UBERON:0000083,1.24e-09,8;UBERON:0009201,1.24e-09,8;UBERON:0006553,1.24e-09,8;UBERON:0003074,1.24e-09,8;UBERON:0003060,1.24e-09,8;UBERON:0000473,1.47e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0004876,2.32e-07,11;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p@chr10:124432364..124432367,+ | |short_description=p@chr10:124432364..124432367,+ | ||
}} | }} |
Latest revision as of 11:14, 23 July 2015
Short description: | p@chr10:124432364..124432367, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:124432364..124432367, + |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.89e-11 | 7 |
germ cell | 9.89e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
epididymis | 1.23e-66 | 1 |
vas deferens | 2.39e-66 | 1 |
spermatic cord | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
male reproductive organ | 2.16e-54 | 11 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
duct | 4.91e-15 | 19 |
reproductive organ | 2.00e-13 | 48 |
internal genitalia | 1.03e-11 | 25 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
mesonephric epithelium | 1.24e-09 | 8 |
mesonephric tubule | 1.24e-09 | 8 |
nephric duct | 1.24e-09 | 8 |
renal duct | 1.24e-09 | 8 |
mesonephric duct | 1.24e-09 | 8 |
pronephric duct | 1.24e-09 | 8 |
testis | 1.47e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
urogenital ridge | 2.32e-07 | 11 |
intraembryonic coelom | 7.48e-07 | 12 |