FFCP PHASE1:Hg19::chr10:17271674..17271688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=294bp_to_uc001iot.1_5end | |association_with_transcript=294bp_to_uc001iot.1_5end | ||
|cluster_id=chr10:17271674..17271688,- | |||
|description=CAGE_peak_9_at_uc001iot.1_5end | |description=CAGE_peak_9_at_uc001iot.1_5end | ||
|id=chr10:17271674..17271688,- | |id=chr10:17271674..17271688,- | ||
|ontology_enrichment_celltype=CL:0000055!1.44e-22!180;CL:0000048!1.37e-17!430;CL:0000723!1.62e-16!436;CL:0000034!1.22e-15!444;CL:0002371!5.77e-15!591;CL:0000144!3.09e-13!625;CL:0000057!3.24e-13!75;CL:0000222!2.02e-11!119;CL:0000680!4.37e-10!57;CL:0000056!4.37e-10!57;CL:0000355!4.37e-10!57;CL:0002320!1.78e-09!365;CL:0000187!2.11e-09!54;CL:0000134!5.01e-09!358;CL:0000219!6.07e-09!390;CL:0000359!1.05e-08!32;CL:0000183!1.51e-08!59;CL:0000192!1.59e-08!42;CL:0000514!1.59e-08!42;CL:0000012!5.02e-08!682;CL:0000548!5.08e-08!679;CL:0000004!5.08e-08!679;CL:0000255!5.08e-08!679;CL:0000393!1.77e-07!60;CL:0000211!1.77e-07!60;CL:0002057!2.31e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.44e-22!180;CL:0000048!1.37e-17!430;CL:0000723!1.62e-16!436;CL:0000034!1.22e-15!444;CL:0002371!5.77e-15!591;CL:0000144!3.09e-13!625;CL:0000057!3.24e-13!75;CL:0000222!2.02e-11!119;CL:0000680!4.37e-10!57;CL:0000056!4.37e-10!57;CL:0000355!4.37e-10!57;CL:0002320!1.78e-09!365;CL:0000187!2.11e-09!54;CL:0000134!5.01e-09!358;CL:0000219!6.07e-09!390;CL:0000359!1.05e-08!32;CL:0000183!1.51e-08!59;CL:0000192!1.59e-08!42;CL:0000514!1.59e-08!42;CL:0000012!5.02e-08!682;CL:0000548!5.08e-08!679;CL:0000004!5.08e-08!679;CL:0000255!5.08e-08!679;CL:0000393!1.77e-07!60;CL:0000211!1.77e-07!60;CL:0002057!2.31e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.08e-09;32!CL:0002551;7.94e-08;6!CL:0000346;3.51e-07;3!CL:1000428;3.51e-07;3!CL:0002592;5.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.84e-11,427;CL:0000057,7.89e-11,76;CL:0000723,1.05e-10,433;CL:0000034,1.18e-10,441;CL:0000359,5.09e-10,32;CL:0000222,3.07e-08,121;CL:0002551,8.57e-08,6;CL:0000192,1.27e-07,43;CL:0000514,1.27e-07,43;CL:0000346,2.66e-07,3;CL:1000428,2.66e-07,3;CL:0002320,2.85e-07,361;CL:0002592,6.20e-07,3;CL:0000187,8.82e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.79e-16!83;UBERON:0002329!1.79e-16!83;UBERON:0003077!1.79e-16!83;UBERON:0003059!1.79e-16!83;UBERON:0007282!1.79e-16!83;UBERON:0009618!1.79e-16!83;UBERON:0007285!1.79e-16!83;UBERON:0004290!1.10e-14!70;UBERON:0002204!1.71e-14!167;UBERON:0000486!8.59e-13!82;UBERON:0001637!1.04e-12!42;UBERON:0003509!1.04e-12!42;UBERON:0004572!1.04e-12!42;UBERON:0002049!7.09e-11!79;UBERON:0007798!7.09e-11!79;UBERON:0000055!8.47e-11!69;UBERON:0002385!2.36e-10!63;UBERON:0001015!2.36e-10!63;UBERON:0000383!2.36e-10!63;UBERON:0001134!2.63e-10!61;UBERON:0002036!2.63e-10!61;UBERON:0003082!2.63e-10!61;UBERON:0001981!1.21e-09!60;UBERON:0007500!1.21e-09!60;UBERON:0004537!1.21e-09!60;UBERON:0006965!1.21e-09!60;UBERON:0002384!1.74e-09!375;UBERON:0004535!1.75e-09!110;UBERON:0004872!5.76e-09!84;UBERON:0004573!7.51e-09!33;UBERON:0004571!7.51e-09!33;UBERON:0001009!1.28e-08!113;UBERON:0003081!1.54e-08!216;UBERON:0002067!5.68e-07!9;UBERON:0004016!5.68e-07!9;UBERON:0010083!5.68e-07!9;UBERON:0000926!7.27e-07!448;UBERON:0004120!7.27e-07!448;UBERON:0006603!7.27e-07!448;UBERON:0005256!9.69e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;3.96e-13;9!UBERON:0001637;1.00e-10;42!UBERON:0003509;1.00e-10;42!UBERON:0004572;1.00e-10;42!UBERON:0004573;2.65e-08;33!UBERON:0004571;2.65e-08;33!UBERON:0007500;4.25e-08;56!UBERON:0001981;4.25e-08;56!UBERON:0004537;4.25e-08;56!UBERON:0000412;3.51e-07;3!UBERON:0001992;3.51e-07;3!UBERON:0003498;5.74e-07;3!UBERON:0005985;5.74e-07;3!UBERON:0001621;5.74e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.13e-14,42;UBERON:0003509,1.13e-14,42;UBERON:0004572,1.13e-14,42;UBERON:0007500,1.46e-13,59;UBERON:0001981,1.46e-13,59;UBERON:0004537,1.46e-13,59;UBERON:0006965,1.46e-13,59;UBERON:0004872,2.22e-13,83;UBERON:0002067,3.43e-13,9;UBERON:0004016,3.43e-13,9;UBERON:0010083,3.43e-13,9;UBERON:0007524,4.77e-13,73;UBERON:0007503,9.15e-13,78;UBERON:0002329,2.22e-12,71;UBERON:0003059,2.22e-12,71;UBERON:0007282,2.22e-12,71;UBERON:0004290,2.22e-12,71;UBERON:0009618,2.22e-12,71;UBERON:0003077,4.18e-12,72;UBERON:0007285,4.18e-12,72;UBERON:0000055,4.61e-12,68;UBERON:0002049,1.37e-11,78;UBERON:0007798,1.37e-11,78;UBERON:0003081,1.64e-11,203;UBERON:0000486,1.93e-11,83;UBERON:0000926,3.44e-11,315;UBERON:0004120,3.44e-11,315;UBERON:0006603,3.44e-11,315;UBERON:0002204,1.40e-10,167;UBERON:0004535,7.22e-10,109;UBERON:0004573,1.48e-09,33;UBERON:0004571,1.48e-09,33;UBERON:0001009,2.22e-09,112;UBERON:0003914,6.68e-08,117;UBERON:0000412,2.66e-07,3;UBERON:0001992,2.66e-07,3;UBERON:0000490,3.92e-07,148;UBERON:0001621,6.20e-07,3;UBERON:0005256,9.09e-07,122 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0.631719873426831,1.30592814099919,0,0,0.218441372130172,0,0.618831764800233,3.97676850873499,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.816002764977012,1.56727360739044,0.572471974262113,0.547497700291537,1.63205431473244,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,1.30206522429511,0.447830948479849,0.32389366601898,0,0.872389432677388,0.755751887377619,0.727752183563449,0.929716147622738,1.23350366406548,0.929119112685311,1.1507695692886,0.256160706529101,0.47296445977717,2.41321976515633,0,1.35426486594342,0.564727018627814,0.545812300115692,0.674170453335254,1.83650335422542,0,0.639337125799041,0.659702600373432,0.797854630486527,1.70489900213078,1.16083695451434,1.70215567407342,3.11411124497787,1.00499466102697,1.0429658368404,0.434377689410233,0,0,1.26584954976354,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.25618263945135,0,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0.604820229674197,0.534880391567015,0,0,1.34140171940727,0.12786256184353,1.0843174571537,0.50133791063589,1.44846518960824,0,1.94653948121054,0.378139268656271,0.443458794925128,1.05401742831751,0.0654895377488563,0,0,0,0.174129737299267,1.19662164466979,0,0,0,0.79504962946682,0,0,1.69592382577203,0.419499436209906,1.37559020970034,1.8809546988313,0.516833518338658,0,0.33472061276467,2.41697590265488,0,1.22031028774085,0.367663080345869,2.43042584364528,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,1.83201743930407,0,0,0,0.496971951695318,0.886413581652058,0.132409180813219,0.860509862246441,1.06400514659507,0,1.06748995729705,3.20667812942308,0,1.34710672069688,0.490385709340376,0,0,0.234321431833797,1.24864030732128,0.570471821544449,3.73621701379503,1.40921398372518,1.61872944368132,1.12360645361799,0.408308342509787,1.22834317311768,1.75653827998801,1.18800285728205,0.741800787835671,0.910161361938026,2.15585442544872,0.336672227908132,0.875829639103749,0,0.877955241761676,2.14541457059314,1.65261864797256,0.340296549480063,1.79389635688862,0,0.423863802319124,1.20036438433761,0.103052529238439,0.515281080091258,0.37223371266318,1.0126579934476,0.194874010322397,3.02920529092937,0.368199594569197,0,1.42003837006646,0,0.339121184620975,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0,0,0.36497735907583,1.56449532329816,5.14592750554308,4.14404764057442,0.464367928031979,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,2.07986957055916,0,0.811512834825538,0,0.577465791044295,0.925971025153221,0,0,0,0.246217006087397,0,0.743155811443641,0.93733833986777,0,0,0,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0,0.6312121671319,0,0,0,1.71072446022705,0.719792448923265,0,0.571652865261156,0.112131084345361,0.43596006883328,0.1466765716419,1.03417372606222,0,0,0,2.08014873822732,0,2.83698264046557,0.532844358032199,0.142977993658148,0,0.823240336780769,0.977208552881205,0.710783897485092,1.58390374586686,0.602878754119172,0,0.199945982364114,0,0.502257091432126,0,0.958499421966331,0,0,0.434343920002738,0.821905290201534,0.358121926479791,0,0.394061520403854,0.862510299438069,0.77005821767849,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0,1.89885516589815,0.831883446123229,0,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,4.1389228517002,0,1.47495334833363,0.781952530212746,0,0,0,0.862856803274467,0.106727557803444,0,0,0.30239029332968,0.248107807818777,0.306923946576125,1.40330047216537,0,0,0.64341568457443,1.48418066444991,0.925258162815933,1.77561725313127,0.739144404124282,0.519254429183621,2.32420756919918,0,0.200506470303285,0,0,0.182091168006717,0.917870904715969,0,0,0,0,0.105551628892876,1.13733384070897,0.510281115829547,0.215915916102139,3.08454505380579,0,0.501689773854853,0,0,0.895499018888713,0,0,0.256450125116389,0.656029291399411,0,0.103041011647722,0,0,0,0,1.6068392984416,0.290012154876366,0.924291702687866,1.38153307253517,0.827019434907183,0.537101224341368,0.580066775656914,0.340906509664404,0,0,0.192190067365106,0,0,1.39453664789186,0.31481234683064,2.7881490806424,0.616067160352178,0.532306030317022,0,1.11194531462352,1.28812398067792,0.372158369359667,0.632758849437452,0.571890581771475,0,0,2.54562598340749,0.78494864019923,0.359744915166629,0.274537029736055,0.353437207037059,1.2130948894399,3.17020642346017,2.94880919367287,0,0,1.05650146756755,0,0.424216295861138,1.13008116620243,2.2054613741845,0.66343897524122,1.75380354101505,0.578775534266688,1.9676842561399,0.608731130888112,2.16876448669825,5.07052084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| ||
|short_description=p9@uc001iot.1 | |short_description=p9@uc001iot.1 | ||
}} | }} |
Latest revision as of 12:14, 23 July 2015
Short description: | p9@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_uc001iot.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 294bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.84e-11 | 427 |
fibroblast | 7.89e-11 | 76 |
somatic stem cell | 1.05e-10 | 433 |
stem cell | 1.18e-10 | 441 |
vascular associated smooth muscle cell | 5.09e-10 | 32 |
mesodermal cell | 3.07e-08 | 121 |
fibroblast of dermis | 8.57e-08 | 6 |
smooth muscle cell | 1.27e-07 | 43 |
smooth muscle myoblast | 1.27e-07 | 43 |
hair follicle dermal papilla cell | 2.66e-07 | 3 |
stem cell of epidermis | 2.66e-07 | 3 |
connective tissue cell | 2.85e-07 | 361 |
smooth muscle cell of the coronary artery | 6.20e-07 | 3 |
muscle cell | 8.82e-07 | 55 |