FFCP PHASE1:Hg19::chr10:17428943..17428962,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000377597_5end | |association_with_transcript=0bp_to_ENST00000377597_5end | ||
|cluster_id=chr10:17428943..17428962,+ | |||
|coexpression_cluster_id=C3000 | |coexpression_cluster_id=C3000 | ||
|description=CAGE_peak_1_at_ENST00000377597_5end | |description=CAGE_peak_1_at_ENST00000377597_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!6.89e-12!7;CL:0000586!6.89e-12!7 | |ontology_enrichment_celltype=CL:0000039!6.89e-12!7;CL:0000586!6.89e-12!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.90e-20;7!CL:0000586;4.90e-20;7!CL:0002541;2.22e-12;3!CL:1000306;8.71e-09;4!CL:0002547;8.71e-09;4 | |ontology_enrichment_celltype_v019=CL:0000039;4.90e-20;7!CL:0000586;4.90e-20;7!CL:0002541;2.22e-12;3!CL:1000306;8.71e-09;4!CL:0002547;8.71e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.82e-20,7;CL:0000586,4.82e-20,7;CL:0002541,2.55e-12,3;CL:1000306,8.71e-09,4;CL:0002547,8.71e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.28e-13;10!UBERON:0005564;3.28e-13;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.28e-13;10!UBERON:0005564;3.28e-13;10 | ||
|ontology_enrichment_disease=DOID:3095!9.29e-08!22;DOID:2994!9.29e-08!22 | |ontology_enrichment_disease=DOID:3095!9.29e-08!22;DOID:2994!9.29e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.25e-16;22!DOID:2994;1.25e-16;22!DOID:1036;8.08e-08;8 | |ontology_enrichment_disease_v019=DOID:3095;1.25e-16;22!DOID:2994;1.25e-16;22!DOID:1036;8.08e-08;8 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.23e-16,22;DOID:2994,1.23e-16,22;DOID:14566,1.11e-08,239;DOID:0050687,1.87e-08,143;DOID:305,4.19e-08,106;DOID:1036,7.79e-08,8;DOID:162,1.88e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.31e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!4.31e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.22e-12;3!UBERON:0000920;2.22e-12;3!UBERON:0000473;1.68e-11;8!UBERON:0001829;6.59e-09;2!UBERON:0004797;8.71e-09;4!UBERON:0000415;8.71e-09;4!UBERON:0007240;8.71e-09;4!UBERON:0005742;8.71e-09;4!UBERON:0005734;8.71e-09;4!UBERON:0004664;8.71e-09;4!UBERON:0004663;8.71e-09;4!UBERON:0003135;2.71e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0003124;2.22e-12;3!UBERON:0000920;2.22e-12;3!UBERON:0000473;1.68e-11;8!UBERON:0001829;6.59e-09;2!UBERON:0004797;8.71e-09;4!UBERON:0000415;8.71e-09;4!UBERON:0007240;8.71e-09;4!UBERON:0005742;8.71e-09;4!UBERON:0005734;8.71e-09;4!UBERON:0004664;8.71e-09;4!UBERON:0004663;8.71e-09;4!UBERON:0003135;2.71e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.55e-12,3;UBERON:0000473,1.61e-11,8;UBERON:0003124,3.09e-09,7;UBERON:0001829,6.85e-09,2;UBERON:0000415,8.71e-09,4;UBERON:0007240,8.71e-09,4;UBERON:0005742,8.71e-09,4;UBERON:0005734,8.71e-09,4;UBERON:0004664,8.71e-09,4;UBERON:0004663,8.71e-09,4;UBERON:0003135,2.62e-08,11 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0,0.382067028739756,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,2.91300197789081,2.58152958673932,1.06400514659507,0,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.580969714347592,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0,0,0,0,0,0,0,0,0.195801157462741,1.02943027143257,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,5.46117361732928,0,0,0.574265537996172,0,0,0,0.308097234229289,0.460511024178389,0.413509717453592,0.214840489736547,0.435050081742686,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.43736026136555,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,15.437533606805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,9.62059999958153,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0,0,0,16.2937139861212,28.1287963353433,9.24503737420653,25.4234850297499,6.06102203490647,3.20591576906518,12.7928346244472,0,0,0,6.09108283666388,6.86218870112088,5.37029078322697,3.98482838720789,0,0,0,0,16.2291479806568,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,10.4206466326994,0.213452994739353,0,0,10.3082936549324,40.3248244975617,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.134366944973453,0,12.8145544480199,0,0,0,0,11.3462264968151,0,0,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,8.10207690781571,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915360273587694,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,20.4287221695509,0,0,0,0,0,0,0,6.57909320228619,0,0,0,0,0,1.21393120847326,0.455324382702595,13.1279507840705,0,0,0,0.0657727735628491,0,0,0.863424021355654,0,0,0,2.15927591218621,0,0,0,0,0,0,0.828864656652147,0,0,3.44181887056222,8.04657604967844,7.92484664260167,0,0,0,0,0,0,0,0,0,0,0,10.2933363923326,0,23.7840181555137,0,0.219881033490858,8.60488208330039,0,0,28.2190377816914,0,34.1730993297358,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,10.0920442348999,0,0,0,0,0,0,0,0,18.6726308755917,15.9527735066995,17.6110916405897,2.54972074354954,8.8181743737635,0.0918948995348449,2.75778293221613,1.36401656792831,3.21556956187414,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.606351566874658,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0,0.382067028739756,0.164201178899891,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,2.91300197789081,2.58152958673932,1.06400514659507,0,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.580969714347592,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0,0,0,0,0,0,0,0,0.195801157462741,1.02943027143257,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,5.46117361732928,0,0,0.574265537996172,0,0,0,0.308097234229289,0.460511024178389,0.413509717453592,0.214840489736547,0.435050081742686,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.43736026136555,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0,0,15.437533606805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,9.62059999958153,0.724999575434793,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0,0,0,16.2937139861212,28.1287963353433,9.24503737420653,25.4234850297499,6.06102203490647,3.20591576906518,12.7928346244472,0,0,0,6.09108283666388,6.86218870112088,5.37029078322697,3.98482838720789,0,0,0,0,16.2291479806568,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,10.4206466326994,0.213452994739353,0,0,10.3082936549324,40.3248244975617,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.134366944973453,0,12.8145544480199,0,0,0,0,11.3462264968151,0,0,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0.157204305099666,0,0,8.10207690781571,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915360273587694,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,20.4287221695509,0,0,0,0,0,0,0,6.57909320228619,0,0,0,0,0,1.21393120847326,0.455324382702595,13.1279507840705,0,0,0,0.0657727735628491,0,0,0.863424021355654,0,0,0,2.15927591218621,0,0,0,0,0,0,0.828864656652147,0,0,3.44181887056222,8.04657604967844,7.92484664260167,0,0,0,0,0,0,0,0,0,0,0,10.2933363923326,0,23.7840181555137,0,0.219881033490858,8.60488208330039,0,0,28.2190377816914,0,34.1730993297358,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,10.0920442348999,0,0,0,0,0,0,0,0,18.6726308755917,15.9527735066995,17.6110916405897,2.54972074354954,8.8181743737635,0.0918948995348449,2.75778293221613,1.36401656792831,3.21556956187414,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.606351566874658,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@ENST00000377597 | |short_description=p1@ENST00000377597 | ||
}} | }} |
Latest revision as of 12:19, 23 July 2015
Short description: | p1@ENST00000377597 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000377597_5end |
Coexpression cluster: | C3000_gastrointestinal_somatostatinoma_choriocarcinoma_smallcell_pancreatic_small_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000377597_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.82e-20 | 7 |
germ cell | 4.82e-20 | 7 |
chorionic membrane mesenchymal stem cell | 2.55e-12 | 3 |
fibroblast of tunica adventitia of artery | 8.71e-09 | 4 |
fibroblast of the aortic adventitia | 8.71e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.55e-12 | 3 |
testis | 1.61e-11 | 8 |
chorion | 3.09e-09 | 7 |
major salivary gland | 6.85e-09 | 2 |
artery wall | 8.71e-09 | 4 |
tunica adventitia of artery | 8.71e-09 | 4 |
adventitia | 8.71e-09 | 4 |
tunica adventitia of blood vessel | 8.71e-09 | 4 |
aorta tunica adventitia | 8.71e-09 | 4 |
aorta wall | 8.71e-09 | 4 |
male reproductive organ | 2.62e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.23e-16 | 22 |
germ cell cancer | 1.23e-16 | 22 |
disease of cellular proliferation | 1.11e-08 | 239 |
cell type cancer | 1.87e-08 | 143 |
carcinoma | 4.19e-08 | 106 |
chronic leukemia | 7.79e-08 | 8 |
cancer | 1.88e-07 | 235 |