FFCP PHASE1:Hg19::chr10:204947..204951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:204947..204951,+ | |||
|description=CAGE_peak_at_chr10:204947..204951,+ | |description=CAGE_peak_at_chr10:204947..204951,+ | ||
|id=chr10:204947..204951,+ | |id=chr10:204947..204951,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.36e-08;4!UBERON:0007284;5.36e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.04e-16!115;UBERON:0001049!3.79e-11!57;UBERON:0005068!3.79e-11!57;UBERON:0006241!3.79e-11!57;UBERON:0007135!3.79e-11!57;UBERON:0002020!5.39e-10!34;UBERON:0003528!5.39e-10!34;UBERON:0002616!8.04e-10!59;UBERON:0003080!3.02e-09!42;UBERON:0001893!3.98e-09!34;UBERON:0002791!4.01e-09!33;UBERON:0000955!4.46e-09!69;UBERON:0006238!4.46e-09!69;UBERON:0002780!9.92e-09!41;UBERON:0001890!9.92e-09!41;UBERON:0006240!9.92e-09!41;UBERON:0001869!1.07e-08!32;UBERON:0001017!1.18e-07!82;UBERON:0002346!1.27e-07!90;UBERON:0000073!7.06e-07!94;UBERON:0001016!7.06e-07!94;UBERON:0005743!8.70e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!4.04e-16!115;UBERON:0001049!3.79e-11!57;UBERON:0005068!3.79e-11!57;UBERON:0006241!3.79e-11!57;UBERON:0007135!3.79e-11!57;UBERON:0002020!5.39e-10!34;UBERON:0003528!5.39e-10!34;UBERON:0002616!8.04e-10!59;UBERON:0003080!3.02e-09!42;UBERON:0001893!3.98e-09!34;UBERON:0002791!4.01e-09!33;UBERON:0000955!4.46e-09!69;UBERON:0006238!4.46e-09!69;UBERON:0002780!9.92e-09!41;UBERON:0001890!9.92e-09!41;UBERON:0006240!9.92e-09!41;UBERON:0001869!1.07e-08!32;UBERON:0001017!1.18e-07!82;UBERON:0002346!1.27e-07!90;UBERON:0000073!7.06e-07!94;UBERON:0001016!7.06e-07!94;UBERON:0005743!8.70e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.55e-10;3!UBERON:0000946;1.55e-10;3!UBERON:0002021;2.33e-10;5!UBERON:0002619;1.13e-09;22!UBERON:0001950;1.62e-08;20!UBERON:0000956;2.30e-08;25!UBERON:0000203;2.30e-08;25!UBERON:0000922;1.69e-07;49!UBERON:0002133;2.67e-07;2!UBERON:0002780;7.51e-07;41!UBERON:0001890;7.51e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.05e-12,114;UBERON:0003978,2.33e-10,3;UBERON:0009751,2.33e-10,3;UBERON:0000946,2.33e-10,3;UBERON:0002523,2.33e-10,3;UBERON:0005983,2.33e-10,3;UBERON:0002165,2.33e-10,3;UBERON:0002062,2.33e-10,3;UBERON:0007280,2.33e-10,3;UBERON:0002021,2.84e-10,5;UBERON:0002346,8.36e-10,86;UBERON:0002619,1.66e-09,22;UBERON:0000073,2.19e-08,53;UBERON:0002616,2.19e-08,53;UBERON:0002780,2.65e-08,41;UBERON:0001890,2.65e-08,41;UBERON:0003080,2.65e-08,41;UBERON:0006240,2.65e-08,41;UBERON:0001950,2.69e-08,20;UBERON:0000956,3.21e-08,25;UBERON:0000203,3.21e-08,25;UBERON:0003075,4.44e-08,82;UBERON:0007284,4.44e-08,82;UBERON:0001049,8.74e-08,56;UBERON:0005068,8.74e-08,56;UBERON:0006241,8.74e-08,56;UBERON:0007135,8.74e-08,56;UBERON:0002791,1.20e-07,32;UBERON:0002133,3.72e-07,2;UBERON:0003528,4.20e-07,34;UBERON:0002020,4.20e-07,34;UBERON:0001893,4.20e-07,34 | |||
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| ||
|short_description=p@chr10:204947..204951,+ | |short_description=p@chr10:204947..204951,+ | ||
}} | }} |
Latest revision as of 12:29, 23 July 2015
Short description: | p@chr10:204947..204951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:204947..204951, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.05e-12 | 114 |
valve | 2.33e-10 | 3 |
cardiac mesenchyme | 2.33e-10 | 3 |
cardial valve | 2.33e-10 | 3 |
tunica intima | 2.33e-10 | 3 |
heart layer | 2.33e-10 | 3 |
endocardium | 2.33e-10 | 3 |
endocardial cushion | 2.33e-10 | 3 |
presumptive endocardium | 2.33e-10 | 3 |
occipital lobe | 2.84e-10 | 5 |
neurectoderm | 8.36e-10 | 86 |
regional part of cerebral cortex | 1.66e-09 | 22 |
regional part of nervous system | 2.19e-08 | 53 |
regional part of brain | 2.19e-08 | 53 |
regional part of forebrain | 2.65e-08 | 41 |
forebrain | 2.65e-08 | 41 |
anterior neural tube | 2.65e-08 | 41 |
future forebrain | 2.65e-08 | 41 |
neocortex | 2.69e-08 | 20 |
cerebral cortex | 3.21e-08 | 25 |
pallium | 3.21e-08 | 25 |
neural plate | 4.44e-08 | 82 |
presumptive neural plate | 4.44e-08 | 82 |
neural tube | 8.74e-08 | 56 |
neural rod | 8.74e-08 | 56 |
future spinal cord | 8.74e-08 | 56 |
neural keel | 8.74e-08 | 56 |
regional part of telencephalon | 1.20e-07 | 32 |
atrioventricular valve | 3.72e-07 | 2 |
brain grey matter | 4.20e-07 | 34 |
gray matter | 4.20e-07 | 34 |
telencephalon | 4.20e-07 | 34 |