FFCP PHASE1:Hg19::chr10:33624581..33624593,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:33624581..33624593,- | |||
|description=CAGE_peak_at_chr10:33624581..33624593,- | |||
|id=chr10:33624581..33624593,- | |||
|ontology_enrichment_celltype=CL:0000055!2.11e-09!180;CL:0000057!1.14e-07!75;CL:0002620!2.51e-07!23;CL:1000507!9.51e-07!12;CL:1000494!9.51e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000650;6.98e-17;2!CL:1000500;6.98e-17;2!CL:1000618;6.98e-17;2!CL:1001318;6.98e-17;2!CL:0002173;6.98e-17;2!CL:0002550;2.65e-09;1!CL:0002581;2.65e-09;1!CL:0000669;6.72e-09;4!CL:1000507;7.95e-08;10!CL:1000494;7.95e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.52e-16,2;CL:1000500,2.52e-16,2;CL:1000618,2.52e-16,2;CL:1001318,2.52e-16,2;CL:0002173,2.52e-16,2;CL:0002581,1.84e-09,1;CL:0002550,3.53e-09,1;CL:0000669,1.27e-08,4;CL:1000507,1.16e-07,10;CL:1000494,1.16e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.02e-09;1!DOID:3111;2.65e-09;1!DOID:3603;2.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.12e-09,1;DOID:3111,1.99e-09,1;DOID:3603,1.99e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.36e-08!143;UBERON:0006554!7.84e-08!44;UBERON:0002100!8.05e-08!216;UBERON:0001008!1.74e-07!45;UBERON:0000475!3.70e-07!365;UBERON:0009773!9.51e-07!12;UBERON:0001231!9.51e-07!12;UBERON:0004810!9.51e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.77e-18;4!UBERON:0003567;6.98e-17;2!UBERON:0003838;6.98e-17;2!UBERON:0003586;6.98e-17;2!UBERON:0005169;6.98e-17;2!UBERON:0002321;6.98e-17;2!UBERON:0005215;6.98e-17;2!UBERON:0002303;6.98e-17;2!UBERON:0002319;6.98e-17;2!UBERON:0005795;2.65e-09;1!UBERON:0007029;2.65e-09;1!UBERON:0004211;7.95e-08;10!UBERON:0009773;7.95e-08;10!UBERON:0001231;7.95e-08;10!UBERON:0004810;7.95e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,7.62e-18,4;UBERON:0003567,2.52e-16,2;UBERON:0003838,2.52e-16,2;UBERON:0003586,2.52e-16,2;UBERON:0005169,2.52e-16,2;UBERON:0002321,2.52e-16,2;UBERON:0005215,2.52e-16,2;UBERON:0002303,2.52e-16,2;UBERON:0002319,2.52e-16,2;UBERON:0007029,2.16e-09,1;UBERON:0004810,1.16e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0.221729397462564,0.263504357079378,1.0478326039817,0,0,0,0,0,0.953962497221368,0.571994910780128,0.74291500265913,0.596287222100115,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.926864265692532,0.286836620748814,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,1.17160715916898,0,0.570471821544449,0.149448680551801,0.704606991862589,0.323745888736263,0.842704840213491,0.61246251376468,0.737005903870608,0.413303124703062,0,0.494533858557114,0,0,0.673344455816265,0.375355559615893,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0.206105058476878,0,0.18611685633159,0.337552664482532,0.389748020644795,0.757301322732344,0.184099797284599,0,0.710019185033229,0.10075209822764,0,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0.179117045405697,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0.356857977594324,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0,0,0.200506470303285,0.460404944679482,0.114814448164607,0.546273504020151,0.131124414959424,0.902399225814824,0.231046011313244,2.35304930753057,0,0.105551628892876,0,0.170093705276516,0,0,1.08378575017541,1.00337954770971,0.764628819135115,0,0.671624264166535,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0.96670718292122,0.154048617114644,0.15350367472613,0.827019434907183,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0,0.384380134730212,0.127612712494584,0.809262246844399,0,0.94443704049192,0.6970372701606,0.308033580176089,0,0.869932992075073,0,0.429374660225974,0,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0.709522128141196,0,0,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33570446027487,0,0,0.19924798825107,0,0,0,0,0,0.808815160325942,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0.455768223388005,0,0,0.217294743844016,0,0.183195186803725,0,0,0.31396051279005,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.343972064943233,0,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0.411125773940253,0.993573058514948,0.0633107959558787,0,0.801588202515337,0,0,0,0,0,0.576219191952599,0.372757606696298,0,0.67952103036807,0.418411385249333,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.806201669840715,0,0,0,0.0824158583811665,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,1.73372556058236,0.681909645754975,1.6896053843105,0,0.575745591958336,0,0.662091970365432,0.5085370753095,0,0,0,0,0,0.681552087141687,0.226624183040251,0.293104467356165,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.470531639396343,0,0.579684114443301,0.74627401443437,0,0,0.189403005275089,0,0,0.457680136793847,0,0,0.295710299979268,0.477890301491107,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,1.47918486351039,0,0,0,0.567515953566836,0.368211900503681,0,0.622077260032973,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,2.0710797781803,0,0.225630985047772,1.41193548092464,1.56302802246618,0,0,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0,0.47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| |||
|short_description=p@chr10:33624581..33624593,- | |||
}} |
Latest revision as of 13:23, 23 July 2015
Short description: | p@chr10:33624581..33624593, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33624581..33624593, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.52e-16 | 2 |
kidney interstitial cell | 2.52e-16 | 2 |
juxtaglomerular complex cell | 2.52e-16 | 2 |
renal interstitial pericyte | 2.52e-16 | 2 |
extraglomerular mesangial cell | 2.52e-16 | 2 |
perirenal preadipocyte | 1.84e-09 | 1 |
fibroblast of the conjuctiva | 3.53e-09 | 1 |
pericyte cell | 1.27e-08 | 4 |
kidney tubule cell | 1.16e-07 | 10 |
nephron tubule epithelial cell | 1.16e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
stroma | 7.62e-18 | 4 |
abdomen connective tissue | 2.52e-16 | 2 |
abdominal segment connective tissue | 2.52e-16 | 2 |
trunk connective tissue | 2.52e-16 | 2 |
interstitial tissue | 2.52e-16 | 2 |
extraglomerular mesangium | 2.52e-16 | 2 |
kidney interstitium | 2.52e-16 | 2 |
juxtaglomerular apparatus | 2.52e-16 | 2 |
mesangium | 2.52e-16 | 2 |
surface | 2.16e-09 | 1 |
nephron tubule epithelium | 1.16e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.12e-09 | 1 |
cystadenocarcinoma | 1.99e-09 | 1 |
mucinous cystadenocarcinoma | 1.99e-09 | 1 |