FFCP PHASE1:Hg19::chr10:75407175..75407186,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:75407175..75407186,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr10:75407175..75407186,- | |||
|id=chr10:75407175..75407186,- | |||
|ontology_enrichment_celltype=CL:0002322!1.19e-13!5;CL:0000047!1.26e-07!8;CL:0000540!5.61e-07!6;CL:0000031!5.61e-07!6;CL:0000404!5.61e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.60e-83;5!CL:0002321;6.73e-28;15!CL:0000540;2.14e-25;6!CL:0000404;2.14e-25;6!CL:0000148;1.17e-15;10!CL:0000147;2.28e-11;14!CL:0000039;2.64e-10;7!CL:0000586;2.64e-10;7!CL:0000710;3.95e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.89e-83,5;CL:0000540,2.75e-25,6;CL:0000031,2.75e-25,6;CL:0000404,2.75e-25,6;CL:0000047,3.73e-19,8;CL:0000148,1.17e-15,10;CL:0000541,1.17e-15,10;CL:0000147,2.28e-11,14;CL:0000039,2.70e-10,7;CL:0000586,2.70e-10,7;CL:0000133,1.33e-09,59;CL:0000710,3.95e-08,20;CL:0000221,7.12e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;2.14e-25;6!UBERON:0009117;1.76e-07;10!UBERON:0005564;1.76e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!4.13e-07!22;DOID:2994!4.13e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.09e-21!94;UBERON:0001016!1.09e-21!94;UBERON:0001049!1.91e-20!57;UBERON:0005068!1.91e-20!57;UBERON:0006241!1.91e-20!57;UBERON:0007135!1.91e-20!57;UBERON:0005743!3.37e-20!86;UBERON:0001017!4.90e-20!82;UBERON:0002616!1.17e-17!59;UBERON:0002346!2.46e-16!90;UBERON:0002780!1.88e-15!41;UBERON:0001890!1.88e-15!41;UBERON:0006240!1.88e-15!41;UBERON:0003080!5.69e-15!42;UBERON:0003075!7.19e-15!86;UBERON:0007284!7.19e-15!86;UBERON:0000955!7.61e-14!69;UBERON:0006238!7.61e-14!69;UBERON:0000924!4.93e-13!173;UBERON:0006601!4.93e-13!173;UBERON:0007023!1.03e-12!115;UBERON:0002020!5.97e-12!34;UBERON:0003528!5.97e-12!34;UBERON:0004121!7.12e-12!169;UBERON:0001893!7.58e-12!34;UBERON:0003056!2.78e-11!61;UBERON:0002308!3.77e-11!9;UBERON:0000125!3.77e-11!9;UBERON:0001869!4.33e-11!32;UBERON:0000153!4.46e-11!129;UBERON:0007811!4.46e-11!129;UBERON:0002791!9.16e-11!33;UBERON:0000033!2.68e-10!123;UBERON:0009663!1.04e-07!7;UBERON:0003135!1.86e-07!11;UBERON:0001872!3.18e-07!5;UBERON:0003076!9.64e-07!15;UBERON:0003057!9.64e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.57e-17;1!UBERON:0000922;9.11e-13;49!UBERON:0000473;3.94e-09;8!UBERON:0003135;7.05e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.02e-09,8;UBERON:0003135,7.15e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.07447495551653,4.37348235460901,5.80969714347592,2.90250954043037,4.03713361401005,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,2.41129722697529,2.47570985875021,4.15440338029185,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.786329709279482,0.327628914576042,0,0.212574920101683,0.247871528518004,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.329821550236287,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0.917899467677836,2.6721740526556,0,1.25353769646188,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,1.62758471326295,0,0,0 | |||
|short_description=p@chr10:75407175..75407186,- | |||
}} |
Latest revision as of 15:35, 23 July 2015
Short description: | p@chr10:75407175..75407186, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:75407175..75407186, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.89e-83 | 5 |
neuron | 2.75e-25 | 6 |
neuroblast | 2.75e-25 | 6 |
electrically signaling cell | 2.75e-25 | 6 |
neuronal stem cell | 3.73e-19 | 8 |
melanocyte | 1.17e-15 | 10 |
melanoblast | 1.17e-15 | 10 |
pigment cell | 2.28e-11 | 14 |
germ line cell | 2.70e-10 | 7 |
germ cell | 2.70e-10 | 7 |
neurectodermal cell | 1.33e-09 | 59 |
neurecto-epithelial cell | 3.95e-08 | 20 |
ectodermal cell | 7.12e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 4.02e-09 | 8 |
male reproductive organ | 7.15e-07 | 11 |