FFCP PHASE1:Hg19::chr10:75423560..75423562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:75423560..75423562,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr10:75423560..75423562,- | |description=CAGE_peak_at_chr10:75423560..75423562,- | ||
|id=chr10:75423560..75423562,- | |id=chr10:75423560..75423562,- | ||
|ontology_enrichment_celltype=CL:0000764!3.72e-15!2;CL:0000765!3.72e-15!2;CL:0000050!3.72e-15!2;CL:0000038!3.72e-15!2;CL:0000558!3.72e-15!2;CL:0000547!3.72e-15!2;CL:0000549!3.72e-15!2;CL:0000550!3.72e-15!2;CL:0000552!3.72e-15!2 | |ontology_enrichment_celltype=CL:0000764!3.72e-15!2;CL:0000765!3.72e-15!2;CL:0000050!3.72e-15!2;CL:0000038!3.72e-15!2;CL:0000558!3.72e-15!2;CL:0000547!3.72e-15!2;CL:0000549!3.72e-15!2;CL:0000550!3.72e-15!2;CL:0000552!3.72e-15!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.31e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.97e-34;1!UBERON:0003124;5.97e-34;1!UBERON:0008814;5.96e-18;2!UBERON:0010056;5.96e-18;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!8.15e-09!1;UBERON:0001961!8.15e-09!1;UBERON:0001744!8.15e-09!1;UBERON:0001735!8.15e-09!1;UBERON:0004913!1.71e-08!1;UBERON:0003703!1.71e-08!1;UBERON:0001174!1.71e-08!1;UBERON:0004914!1.71e-08!1;UBERON:0005795!5.11e-08!22 | |ontology_enrichment_uberon=UBERON:0002372!8.15e-09!1;UBERON:0001961!8.15e-09!1;UBERON:0001744!8.15e-09!1;UBERON:0001735!8.15e-09!1;UBERON:0004913!1.71e-08!1;UBERON:0003703!1.71e-08!1;UBERON:0001174!1.71e-08!1;UBERON:0004914!1.71e-08!1;UBERON:0005795!5.11e-08!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;5.97e-34;1!UBERON:0001961;5.97e-34;1!UBERON:0001744;5.97e-34;1!UBERON:0001042;5.97e-34;1!UBERON:0001735;5.97e-34;1!UBERON:0000341;5.96e-18;2!UBERON:0006562;9.86e-18;2!UBERON:0001723;1.96e-12;3!UBERON:0001033;1.96e-12;3!UBERON:0001043;2.74e-12;3!UBERON:0003124;2.74e-12;3!UBERON:0000920;2.74e-12;3!UBERON:0001987;1.50e-09;4!UBERON:0000974;7.37e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,9.85e-34,1;UBERON:0001961,9.85e-34,1;UBERON:0001744,9.85e-34,1;UBERON:0001735,9.85e-34,1;UBERON:0003124,8.62e-20,7;UBERON:0000341,5.48e-18,2;UBERON:0001042,3.47e-14,10;UBERON:0009145,3.47e-14,10;UBERON:0006562,5.42e-13,11;UBERON:0001723,2.07e-12,3;UBERON:0001033,2.07e-12,3;UBERON:0010056,2.07e-12,3;UBERON:0000920,2.31e-12,3;UBERON:0001043,2.59e-12,3;UBERON:0009143,2.59e-12,3;UBERON:0005631,1.99e-10,14;UBERON:0000158,1.99e-10,14;UBERON:0001987,1.57e-09,4;UBERON:0004340,1.57e-09,4;UBERON:0001557,6.15e-08,19;UBERON:0007023,1.12e-07,114;UBERON:0000166,5.57e-07,22 | |||
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|short_description=p@chr10:75423560..75423562,- | |short_description=p@chr10:75423560..75423562,- | ||
}} | }} |
Latest revision as of 15:35, 23 July 2015
Short description: | p@chr10:75423560..75423562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:75423560..75423562, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 9.85e-34 | 1 |
mucosa-associated lymphoid tissue | 9.85e-34 | 1 |
lymphoid tissue | 9.85e-34 | 1 |
tonsillar ring | 9.85e-34 | 1 |
chorion | 8.62e-20 | 7 |
throat | 5.48e-18 | 2 |
chordate pharynx | 3.47e-14 | 10 |
pharyngeal region of foregut | 3.47e-14 | 10 |
pharynx | 5.42e-13 | 11 |
tongue | 2.07e-12 | 3 |
gustatory system | 2.07e-12 | 3 |
future tongue | 2.07e-12 | 3 |
egg chorion | 2.31e-12 | 3 |
esophagus | 2.59e-12 | 3 |
esophageal region | 2.59e-12 | 3 |
extraembryonic membrane | 1.99e-10 | 14 |
membranous layer | 1.99e-10 | 14 |
placenta | 1.57e-09 | 4 |
allantois | 1.57e-09 | 4 |
upper respiratory tract | 6.15e-08 | 19 |
adult organism | 1.12e-07 | 114 |
oral opening | 5.57e-07 | 22 |