FFCP PHASE1:Hg19::chr10:8107688..8107696,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:8107688..8107696,+
|short_description=p@chr10:8107688..8107696,+
|description=CAGE_peak_at_chr10:8107688..8107696,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:8107688..8107696,+ | |||
|coexpression_cluster_id=C3051 | |||
|description=CAGE_peak_at_chr10:8107688..8107696,+ | |||
|id=chr10:8107688..8107696,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.17e-12!25;CL:0000827!3.17e-12!25;CL:0000791!2.01e-10!18;CL:0000789!2.01e-10!18;CL:0002420!2.01e-10!18;CL:0002419!2.01e-10!18;CL:0000790!2.01e-10!18;CL:0000838!6.20e-10!52;CL:0000542!1.47e-09!53;CL:0000051!1.47e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.23e-12;25!CL:0000791;3.51e-10;18!CL:0000789;3.51e-10;18!CL:0002419;3.51e-10;18!CL:0000623;6.56e-09;3!CL:0000624;1.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.82e-12,25;CL:0000827,2.82e-12,25;CL:0000791,3.51e-10,18;CL:0000789,3.51e-10,18;CL:0002420,3.51e-10,18;CL:0002419,3.51e-10,18;CL:0000790,3.51e-10,18;CL:0000623,7.30e-09,3;CL:0000825,7.30e-09,3;CL:0000838,1.37e-07,52;CL:0000624,1.66e-07,6;CL:0000542,2.22e-07,53;CL:0000051,2.22e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.51e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.67e-11;4!DOID:1612;2.67e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.72e-11,4;DOID:1612,2.72e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.41e-09!15;UBERON:0000179!2.41e-09!15;UBERON:0000463!2.41e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;8.09e-11;10!UBERON:0000158;8.09e-11;10!UBERON:0000478;1.36e-09;24!UBERON:0000178;8.70e-09;15!UBERON:0000179;8.70e-09;15!UBERON:0000463;8.70e-09;15!UBERON:0000305;1.92e-08;7!UBERON:0006947;2.81e-08;3!UBERON:0004054;2.81e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.27e-09,14;UBERON:0000158,1.27e-09,14;UBERON:0000478,1.54e-09,24;UBERON:0000178,1.04e-08,15;UBERON:0000179,1.04e-08,15;UBERON:0000463,1.04e-08,15;UBERON:0000305,1.97e-08,7;UBERON:0006947,3.15e-08,3;UBERON:0004054,3.15e-08,3;UBERON:0004871,2.50e-07,8 | |||
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| ||
|short_description=p@chr10:8107688..8107696,+ | |||
}} | }} |
Latest revision as of 16:00, 23 July 2015
Short description: | p@chr10:8107688..8107696, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8107688..8107696, + |
Coexpression cluster: | C3051_MCF7_CD4_CD8_seminal_breast_choriocarcinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.82e-12 | 25 |
pro-T cell | 2.82e-12 | 25 |
mature alpha-beta T cell | 3.51e-10 | 18 |
alpha-beta T cell | 3.51e-10 | 18 |
immature T cell | 3.51e-10 | 18 |
mature T cell | 3.51e-10 | 18 |
immature alpha-beta T cell | 3.51e-10 | 18 |
natural killer cell | 7.30e-09 | 3 |
pro-NK cell | 7.30e-09 | 3 |
lymphoid lineage restricted progenitor cell | 1.37e-07 | 52 |
CD4-positive, alpha-beta T cell | 1.66e-07 | 6 |
lymphocyte | 2.22e-07 | 53 |
common lymphoid progenitor | 2.22e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.27e-09 | 14 |
membranous layer | 1.27e-09 | 14 |
extraembryonic structure | 1.54e-09 | 24 |
blood | 1.04e-08 | 15 |
haemolymphatic fluid | 1.04e-08 | 15 |
organism substance | 1.04e-08 | 15 |
amnion | 1.97e-08 | 7 |
male genital duct | 3.15e-08 | 3 |
internal male genitalia | 3.15e-08 | 3 |
somatic layer of lateral plate mesoderm | 2.50e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.72e-11 | 4 |
breast cancer | 2.72e-11 | 4 |