FFCP PHASE1:Hg19::chr10:8495748..8495753,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:8495748..8495753,- | |||
|description=CAGE_peak_at_chr10:8495748..8495753,- | |description=CAGE_peak_at_chr10:8495748..8495753,- | ||
|id=chr10:8495748..8495753,- | |id=chr10:8495748..8495753,- | ||
|ontology_enrichment_celltype=CL:0002541!3.94e-15!3;CL:0001014!8.15e-11!2;CL:0001016!8.15e-11!2;CL:0002536!1.51e-10!2;CL:0002537!3.87e-09!5;CL:0002592!2.68e-07!3 | |ontology_enrichment_celltype=CL:0002541!3.94e-15!3;CL:0001014!8.15e-11!2;CL:0001016!8.15e-11!2;CL:0002536!1.51e-10!2;CL:0002537!3.87e-09!5;CL:0002592!2.68e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.67e-30;3!CL:0000349;6.67e-19;19!CL:0001014;1.48e-12;2!CL:0001016;1.48e-12;2!CL:0002536;2.74e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.71e-30,3;CL:0000349,5.81e-19,19;CL:0001014,1.48e-12,2;CL:0001016,1.48e-12,2;CL:0002536,2.32e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;3.67e-23;1!DOID:9119;3.67e-23;1!DOID:3149;3.67e-23;1!DOID:4231;2.74e-12;2!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2!DOID:1907;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.28e-23,1;DOID:3149,3.28e-23,1;DOID:9119,4.10e-23,1;DOID:3451,2.59e-12,2;DOID:4159,2.59e-12,2;DOID:0060122,2.59e-12,2;DOID:4231,3.62e-12,2;DOID:1907,3.62e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.86e-26!14;UBERON:0000158!9.86e-26!14;UBERON:0000305!7.10e-17!7;UBERON:0000476!3.94e-15!3;UBERON:0000920!3.94e-15!3;UBERON:0004871!9.83e-15!8;UBERON:0000478!2.46e-14!24;UBERON:0003124!7.04e-11!7;UBERON:0003498!7.06e-09!5;UBERON:0005985!7.06e-09!5;UBERON:0004923!8.87e-08!57;UBERON:0001621!2.68e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.13e-35;10!UBERON:0000158;2.13e-35;10!UBERON:0003124;2.67e-30;3!UBERON:0000920;2.67e-30;3!UBERON:0000478;4.58e-15;24!UBERON:0000305;1.69e-13;7!UBERON:0000014;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.71e-30,3;UBERON:0005631,1.53e-25,14;UBERON:0000158,1.53e-25,14;UBERON:0000478,4.11e-15,24;UBERON:0003124,1.08e-13,7;UBERON:0000305,1.69e-13,7;UBERON:0004871,6.16e-12,8;UBERON:0000014,8.61e-07,4 | |||
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|short_description=p@chr10:8495748..8495753,- | |short_description=p@chr10:8495748..8495753,- | ||
}} | }} |
Latest revision as of 16:13, 23 July 2015
Short description: | p@chr10:8495748..8495753, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8495748..8495753, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.71e-30 | 3 |
extraembryonic cell | 5.81e-19 | 19 |
CD1a-positive Langerhans cell | 1.48e-12 | 2 |
immature CD1a-positive Langerhans cell | 1.48e-12 | 2 |
amniotic epithelial cell | 2.32e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.71e-30 | 3 |
extraembryonic membrane | 1.53e-25 | 14 |
membranous layer | 1.53e-25 | 14 |
extraembryonic structure | 4.11e-15 | 24 |
chorion | 1.08e-13 | 7 |
amnion | 1.69e-13 | 7 |
somatic layer of lateral plate mesoderm | 6.16e-12 | 8 |
zone of skin | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.28e-23 | 1 |
keratoacanthoma | 3.28e-23 | 1 |
acute myeloid leukemia | 4.10e-23 | 1 |
skin carcinoma | 2.59e-12 | 2 |
skin cancer | 2.59e-12 | 2 |
integumentary system cancer | 2.59e-12 | 2 |
histiocytoma | 3.62e-12 | 2 |
malignant fibroxanthoma | 3.62e-12 | 2 |