FFCP PHASE1:Hg19::chr10:92754351..92754372,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000412362_5end | |association_with_transcript=-4bp_to_ENST00000412362_5end | ||
|cluster_id=chr10:92754351..92754372,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_1_at_ENST00000412362_5end | |description=CAGE_peak_1_at_ENST00000412362_5end | ||
|id=chr10:92754351..92754372,+ | |id=chr10:92754351..92754372,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.29e-22!24;CL:0000826!2.29e-22!24;CL:0002087!7.80e-14!119;CL:0002031!3.31e-13!124;CL:0000838!6.74e-13!52;CL:0000542!1.23e-12!53;CL:0000051!1.23e-12!53;CL:0000946!2.46e-12!1;CL:0000786!2.46e-12!1;CL:0000980!2.46e-12!1;CL:0000738!1.70e-11!140;CL:0002032!1.77e-09!165;CL:0000837!1.77e-09!165;CL:0000037!5.13e-09!172;CL:0000566!5.13e-09!172;CL:0000988!2.03e-08!182;CL:0000785!8.52e-07!2;CL:0000955!8.52e-07!2;CL:0000818!8.52e-07!2;CL:0000954!8.52e-07!2;CL:0000816!8.52e-07!2 | |ontology_enrichment_celltype=CL:0000945!2.29e-22!24;CL:0000826!2.29e-22!24;CL:0002087!7.80e-14!119;CL:0002031!3.31e-13!124;CL:0000838!6.74e-13!52;CL:0000542!1.23e-12!53;CL:0000051!1.23e-12!53;CL:0000946!2.46e-12!1;CL:0000786!2.46e-12!1;CL:0000980!2.46e-12!1;CL:0000738!1.70e-11!140;CL:0002032!1.77e-09!165;CL:0000837!1.77e-09!165;CL:0000037!5.13e-09!172;CL:0000566!5.13e-09!172;CL:0000988!2.03e-08!182;CL:0000785!8.52e-07!2;CL:0000955!8.52e-07!2;CL:0000818!8.52e-07!2;CL:0000954!8.52e-07!2;CL:0000816!8.52e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.62e-30;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.12e-30,24;CL:0000826,8.12e-30,24;CL:0000838,5.23e-14,52;CL:0000542,9.46e-14,53;CL:0000051,9.46e-14,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!1.11e-12!1;DOID:0050177!1.11e-12!1;DOID:0050427!1.11e-12!1;DOID:2513!1.25e-12!1;DOID:3451!6.07e-07!2;DOID:4159!6.07e-07!2;DOID:0060122!6.07e-07!2 | |ontology_enrichment_disease=DOID:630!1.11e-12!1;DOID:0050177!1.11e-12!1;DOID:0050427!1.11e-12!1;DOID:2513!1.25e-12!1;DOID:3451!6.07e-07!2;DOID:4159!6.07e-07!2;DOID:0060122!6.07e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:630;2.37e-29;1!DOID:0050177;2.37e-29;1!DOID:0050427;2.37e-29;1!DOID:2513;2.37e-29;1!DOID:3451;2.05e-15;2!DOID:4159;2.05e-15;2!DOID:0060122;2.05e-15;2!DOID:0060058;2.74e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.37e-29,1;DOID:0050177,2.37e-29,1;DOID:0050427,2.37e-29,1;DOID:2513,3.16e-29,1;DOID:3451,2.37e-15,2;DOID:4159,2.37e-15,2;DOID:0060122,2.37e-15,2;DOID:0060058,2.66e-12,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.20e-10;3!UBERON:0000014;2.26e-08;4!UBERON:0004177;6.77e-07;5!UBERON:0005057;6.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.20e-10,3;UBERON:0004854,1.20e-10,3;UBERON:0009034,1.20e-10,3;UBERON:0002095,1.20e-10,3;UBERON:0004782,1.20e-10,3;UBERON:0003281,1.20e-10,3;UBERON:0009664,1.20e-10,3;UBERON:0002296,1.20e-10,3;UBERON:0005602,1.20e-10,3;UBERON:0001179,1.20e-10,3;UBERON:0006293,1.20e-10,3;UBERON:0000014,2.43e-08,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.57155289432381,4.10502947249729,3.85682828437028,0,0,0,0,0,0,0,4.12290774213522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52625341533556 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.57155289432381,4.10502947249729,3.85682828437028,0,0,0,0,0,0,0,4.12290774213522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,3.42143546427988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09935271517422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52625341533556 | ||
|short_description=p1@ENST00000412362 | |short_description=p1@ENST00000412362 | ||
}} | }} |
Latest revision as of 16:43, 23 July 2015
Short description: | p1@ENST00000412362 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412362_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -4bp_to_ENST00000412362_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.12e-30 | 24 |
pro-B cell | 8.12e-30 | 24 |
lymphoid lineage restricted progenitor cell | 5.23e-14 | 52 |
lymphocyte | 9.46e-14 | 53 |
common lymphoid progenitor | 9.46e-14 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.20e-10 | 3 |
gastrointestinal system mesentery | 1.20e-10 | 3 |
stomach region | 1.20e-10 | 3 |
mesentery | 1.20e-10 | 3 |
gastrointestinal system serosa | 1.20e-10 | 3 |
mesentery of stomach | 1.20e-10 | 3 |
gut mesentery | 1.20e-10 | 3 |
dorsal mesentery | 1.20e-10 | 3 |
dorsal mesogastrium | 1.20e-10 | 3 |
peritoneal cavity | 1.20e-10 | 3 |
spleen primordium | 1.20e-10 | 3 |
zone of skin | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.37e-29 | 1 |
monogenic disease | 2.37e-29 | 1 |
xeroderma pigmentosum | 2.37e-29 | 1 |
basal cell carcinoma | 3.16e-29 | 1 |
skin carcinoma | 2.37e-15 | 2 |
skin cancer | 2.37e-15 | 2 |
integumentary system cancer | 2.37e-15 | 2 |
lymphoma | 2.66e-12 | 10 |