FFCP PHASE1:Hg19::chr11:102665984..102666003,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:102665984..102666003,- to FFCP PHASE1:Hg19::chr11:102665984..102666003,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:102665984..102666003,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102665984..102666003,- | |||
|id=chr11:102665984..102666003,- | |||
|ontology_enrichment_celltype=CL:0000055!3.69e-26!180;CL:0000359!9.60e-26!32;CL:0000192!3.75e-23!42;CL:0000514!3.75e-23!42;CL:0000187!5.25e-19!54;CL:0000183!9.27e-18!59;CL:0000680!2.14e-17!57;CL:0000056!2.14e-17!57;CL:0000355!2.14e-17!57;CL:0000393!5.85e-16!60;CL:0000211!5.85e-16!60;CL:0000057!3.72e-15!75;CL:0000222!1.10e-14!119;CL:0002371!2.35e-14!591;CL:0002539!4.23e-13!10;CL:0000548!4.52e-13!679;CL:0000004!4.52e-13!679;CL:0000255!4.52e-13!679;CL:0000012!8.20e-13!682;CL:0000220!1.03e-12!246;CL:0000144!1.17e-12!625;CL:0002321!1.98e-12!248;CL:0000048!7.30e-11!430;CL:0000723!1.14e-10!436;CL:0002620!2.44e-10!23;CL:0000034!6.25e-10!444;CL:0002494!1.09e-09!16;CL:0000003!1.47e-09!722;CL:0002139!1.58e-09!24;CL:1000413!7.10e-08!9;CL:0002551!2.28e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.03e-36;32!CL:0000192;1.79e-20;43!CL:0002539;2.79e-19;10!CL:1000306;1.04e-10;4!CL:0002547;1.04e-10;4!CL:0002594;3.57e-10;4!CL:0000187;2.12e-09;55!CL:0002595;2.91e-09;5!CL:0002494;4.54e-09;16!CL:0002592;1.08e-08;3!CL:0002582;5.11e-08;3!CL:0000393;8.22e-08;61!CL:0000211;8.22e-08;61!CL:0002139;1.85e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.18e-37,32;CL:0000192,3.70e-28,43;CL:0000514,3.70e-28,43;CL:0000187,1.84e-20,55;CL:0002539,3.05e-19,10;CL:0000680,4.81e-19,58;CL:0000056,4.81e-19,58;CL:0000355,4.81e-19,58;CL:0000393,9.08e-18,61;CL:0000211,9.08e-18,61;CL:0000222,1.84e-15,121;CL:1000306,1.17e-10,4;CL:0002547,1.17e-10,4;CL:0002594,3.41e-10,4;CL:0000048,2.03e-09,427;CL:0002595,2.86e-09,5;CL:0002321,3.09e-09,250;CL:0002494,4.47e-09,16;CL:0000723,4.52e-09,433;CL:0002592,1.04e-08,3;CL:0000034,1.27e-08,441;CL:0000057,3.86e-08,76;CL:0002582,5.71e-08,3;CL:0002139,1.58e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.79e-20;43!CL:0000355;1.39e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.69e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.78e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.50e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.53e-41!42;UBERON:0003509!7.53e-41!42;UBERON:0004572!7.53e-41!42;UBERON:0000055!2.23e-33!69;UBERON:0001981!9.15e-32!60;UBERON:0007500!9.15e-32!60;UBERON:0004537!9.15e-32!60;UBERON:0006965!9.15e-32!60;UBERON:0004573!2.60e-31!33;UBERON:0004571!2.60e-31!33;UBERON:0004872!7.68e-30!84;UBERON:0002049!6.35e-27!79;UBERON:0007798!6.35e-27!79;UBERON:0004535!6.95e-24!110;UBERON:0001009!9.78e-23!113;UBERON:0000914!1.35e-21!83;UBERON:0002329!1.35e-21!83;UBERON:0003077!1.35e-21!83;UBERON:0003059!1.35e-21!83;UBERON:0007282!1.35e-21!83;UBERON:0009618!1.35e-21!83;UBERON:0007285!1.35e-21!83;UBERON:0004290!6.25e-20!70;UBERON:0000947!1.12e-19!21;UBERON:0010191!1.12e-19!21;UBERON:0000486!6.20e-19!82;UBERON:0003914!6.72e-19!118;UBERON:0001134!1.63e-15!61;UBERON:0002036!1.63e-15!61;UBERON:0003082!1.63e-15!61;UBERON:0002385!1.14e-14!63;UBERON:0001015!1.14e-14!63;UBERON:0000383!1.14e-14!63;UBERON:0004237!4.23e-13!10;UBERON:0004695!4.23e-13!10;UBERON:0002111!4.23e-13!10;UBERON:0004178!4.23e-13!10;UBERON:0003102!6.16e-11!95;UBERON:0000490!1.13e-10!138;UBERON:0005256!1.65e-10!143;UBERON:0001135!3.21e-09!15;UBERON:0004111!6.91e-09!241;UBERON:0002199!7.19e-09!45;UBERON:0002416!7.19e-09!45;UBERON:0002097!1.85e-08!40;UBERON:0003915!7.10e-08!9;UBERON:0004700!7.10e-08!9;UBERON:0001917!7.10e-08!9;UBERON:0000948!1.86e-07!24;UBERON:0005498!1.86e-07!24;UBERON:0004140!1.86e-07!24;UBERON:0009881!1.86e-07!24;UBERON:0004141!1.86e-07!24;UBERON:0003084!1.86e-07!24;UBERON:0007005!1.86e-07!24;UBERON:0004139!1.86e-07!24;UBERON:0004291!1.86e-07!24;UBERON:0000477!2.42e-07!286;UBERON:0003498!4.76e-07!5;UBERON:0005985!4.76e-07!5;UBERON:0000467!7.62e-07!625;UBERON:0000480!8.90e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.80e-36;42!UBERON:0003509;1.80e-36;42!UBERON:0004572;1.80e-36;42!UBERON:0004573;1.45e-32;33!UBERON:0004571;1.45e-32;33!UBERON:0007500;1.64e-21;56!UBERON:0001981;1.64e-21;56!UBERON:0004537;1.64e-21;56!UBERON:0000947;1.32e-20;21!UBERON:0010191;1.32e-20;21!UBERON:0000055;2.53e-20;65!UBERON:0004237;2.79e-19;10!UBERON:0004695;2.79e-19;10!UBERON:0002111;2.79e-19;10!UBERON:0004178;2.79e-19;10!UBERON:0002049;1.85e-16;75!UBERON:0007798;1.85e-16;75!UBERON:0003914;2.31e-14;74!UBERON:0001135;3.38e-12;15!UBERON:0004797;1.04e-10;4!UBERON:0000415;1.04e-10;4!UBERON:0007240;1.04e-10;4!UBERON:0005742;1.04e-10;4!UBERON:0005734;1.04e-10;4!UBERON:0004664;1.04e-10;4!UBERON:0004663;1.04e-10;4!UBERON:0001310;3.57e-10;4!UBERON:0003834;2.91e-09;5!UBERON:0001533;2.91e-09;5!UBERON:0003498;1.08e-08;3!UBERON:0005985;1.08e-08;3!UBERON:0001621;1.08e-08;3!UBERON:0004535;1.46e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.16e-50,42;UBERON:0003509,3.16e-50,42;UBERON:0004572,3.16e-50,42;UBERON:0000055,1.78e-40,68;UBERON:0007500,8.70e-38,59;UBERON:0001981,8.70e-38,59;UBERON:0004537,8.70e-38,59;UBERON:0006965,8.70e-38,59;UBERON:0004573,4.57e-36,33;UBERON:0004571,4.57e-36,33;UBERON:0002049,6.98e-34,78;UBERON:0007798,6.98e-34,78;UBERON:0004872,1.05e-33,83;UBERON:0004535,3.35e-29,109;UBERON:0001009,4.25e-28,112;UBERON:0003914,1.96e-23,117;UBERON:0002329,1.05e-21,71;UBERON:0003059,1.05e-21,71;UBERON:0007282,1.05e-21,71;UBERON:0004290,1.05e-21,71;UBERON:0009618,1.05e-21,71;UBERON:0003077,2.74e-21,72;UBERON:0007285,2.74e-21,72;UBERON:0007524,6.96e-21,73;UBERON:0007503,1.37e-20,78;UBERON:0000947,1.46e-20,21;UBERON:0010191,1.46e-20,21;UBERON:0004237,3.05e-19,10;UBERON:0004695,3.05e-19,10;UBERON:0002111,3.05e-19,10;UBERON:0004178,3.05e-19,10;UBERON:0000486,8.97e-19,83;UBERON:0001134,2.27e-17,62;UBERON:0002036,2.27e-17,62;UBERON:0003082,2.27e-17,62;UBERON:0002385,1.29e-16,64;UBERON:0001015,1.29e-16,64;UBERON:0000383,1.29e-16,64;UBERON:0000490,1.66e-14,148;UBERON:0001135,3.58e-12,15;UBERON:0004111,1.24e-11,240;UBERON:0005256,4.21e-11,122;UBERON:0000926,7.08e-11,315;UBERON:0004120,7.08e-11,315;UBERON:0006603,7.08e-11,315;UBERON:0000415,1.17e-10,4;UBERON:0007240,1.17e-10,4;UBERON:0005742,1.17e-10,4;UBERON:0005734,1.17e-10,4;UBERON:0004664,1.17e-10,4;UBERON:0004663,1.17e-10,4;UBERON:0001310,3.41e-10,4;UBERON:0000025,5.17e-10,192;UBERON:0003834,2.86e-09,5;UBERON:0001533,2.86e-09,5;UBERON:0003081,5.01e-09,203;UBERON:0003498,1.03e-08,5;UBERON:0005985,1.03e-08,5;UBERON:0001621,1.04e-08,3;UBERON:0000483,1.03e-07,306;UBERON:0000119,1.58e-07,309;UBERON:0000948,4.98e-07,24;UBERON:0005498,4.98e-07,24;UBERON:0004140,4.98e-07,24;UBERON:0009881,4.98e-07,24;UBERON:0004141,4.98e-07,24;UBERON:0003084,4.98e-07,24;UBERON:0007005,4.98e-07,24;UBERON:0004139,4.98e-07,24;UBERON:0004291,4.98e-07,24 | |||
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| ||
|short_description=p@chr11:102665984..102666003,- | |||
}} | }} |
Latest revision as of 17:30, 23 July 2015
Short description: | p@chr11:102665984..102666003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102665984..102666003, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.18e-37 | 32 |
smooth muscle cell | 3.70e-28 | 43 |
smooth muscle myoblast | 3.70e-28 | 43 |
muscle cell | 1.84e-20 | 55 |
aortic smooth muscle cell | 3.05e-19 | 10 |
muscle precursor cell | 4.81e-19 | 58 |
myoblast | 4.81e-19 | 58 |
multi-potent skeletal muscle stem cell | 4.81e-19 | 58 |
electrically responsive cell | 9.08e-18 | 61 |
electrically active cell | 9.08e-18 | 61 |
mesodermal cell | 1.84e-15 | 121 |
fibroblast of tunica adventitia of artery | 1.17e-10 | 4 |
fibroblast of the aortic adventitia | 1.17e-10 | 4 |
smooth muscle cell of the umbilical artery | 3.41e-10 | 4 |
multi fate stem cell | 2.03e-09 | 427 |
smooth muscle cell of the subclavian artery | 2.86e-09 | 5 |
embryonic cell | 3.09e-09 | 250 |
cardiocyte | 4.47e-09 | 16 |
somatic stem cell | 4.52e-09 | 433 |
smooth muscle cell of the coronary artery | 1.04e-08 | 3 |
stem cell | 1.27e-08 | 441 |
fibroblast | 3.86e-08 | 76 |
visceral preadipocyte | 5.71e-08 | 3 |
endothelial cell of vascular tree | 1.58e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.50e-07 | 14 |