FFCP PHASE1:Hg19::chr11:102667504..102667527,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:102667504..102667527,- to FFCP PHASE1:Hg19::chr11:102667504..102667527,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:102667504..102667527,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102667504..102667527,- | |||
|id=chr11:102667504..102667527,- | |||
|ontology_enrichment_celltype=CL:0000359!1.69e-25!32;CL:0000055!3.44e-21!180;CL:0000192!1.11e-20!42;CL:0000514!1.11e-20!42;CL:0000187!1.53e-16!54;CL:0000183!1.13e-15!59;CL:0000680!3.35e-15!57;CL:0000056!3.35e-15!57;CL:0000355!3.35e-15!57;CL:0000393!5.29e-14!60;CL:0000211!5.29e-14!60;CL:0000222!1.33e-13!119;CL:0000057!5.51e-13!75;CL:0002139!5.60e-11!24;CL:0002371!1.67e-10!591;CL:0000548!2.93e-10!679;CL:0000004!2.93e-10!679;CL:0000255!2.93e-10!679;CL:1000413!3.88e-10!9;CL:0002539!4.12e-10!10;CL:0000220!4.52e-10!246;CL:0000012!4.60e-10!682;CL:0002321!7.42e-10!248;CL:0002494!8.26e-09!16;CL:0000144!1.11e-08!625;CL:0000723!1.77e-08!436;CL:0000071!3.19e-08!18;CL:0002546!3.19e-08!18;CL:0000048!4.52e-08!430;CL:0000034!6.46e-08!444;CL:0000003!1.34e-07!722;CL:0002594!1.50e-07!4;CL:1000306!1.76e-07!4;CL:0002547!1.76e-07!4;CL:0002620!2.28e-07!23;CL:0000115!2.89e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.47e-35;32!CL:0000192;4.79e-20;43!CL:0002594;3.67e-13;4!CL:1000306;5.42e-13;4!CL:0002547;5.42e-13;4!CL:0002494;1.22e-11;16!CL:0002595;1.41e-11;5!CL:0002539;2.11e-11;10!CL:0002592;6.94e-11;3!CL:0000187;7.47e-10;55!CL:0002139;2.24e-08;24!CL:0000393;2.60e-08;61!CL:0000211;2.60e-08;61!CL:0002593;4.63e-08;2!CL:0000569;7.12e-08;4!CL:0002583;2.47e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.43e-37,32;CL:0000192,1.53e-28,43;CL:0000514,1.53e-28,43;CL:0000187,4.75e-21,55;CL:0000680,1.15e-19,58;CL:0000056,1.15e-19,58;CL:0000355,1.15e-19,58;CL:0000393,2.03e-18,61;CL:0000211,2.03e-18,61;CL:0000222,3.57e-17,121;CL:0002594,3.80e-13,4;CL:1000306,5.19e-13,4;CL:0002547,5.19e-13,4;CL:0002494,9.69e-12,16;CL:0002595,1.43e-11,5;CL:0002539,2.20e-11,10;CL:0002592,7.07e-11,3;CL:0002321,2.32e-09,250;CL:0002139,2.09e-08,24;CL:0002593,4.63e-08,2;CL:0000569,5.91e-08,4;CL:0000011,5.91e-08,4;CL:0000723,1.43e-07,433;CL:0000048,2.73e-07,427;CL:0002583,2.76e-07,2;CL:0000034,3.18e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;4.79e-20;43!CL:0000355;8.73e-09;58!CL:0000011;7.12e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!9.17e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:0060072;1.93e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,1.67e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!9.74e-44!42;UBERON:0003509!9.74e-44!42;UBERON:0004572!9.74e-44!42;UBERON:0000055!8.22e-35!69;UBERON:0001981!4.71e-34!60;UBERON:0007500!4.71e-34!60;UBERON:0004537!4.71e-34!60;UBERON:0006965!4.71e-34!60;UBERON:0004573!6.76e-34!33;UBERON:0004571!6.76e-34!33;UBERON:0004872!6.77e-31!84;UBERON:0002049!1.68e-28!79;UBERON:0007798!1.68e-28!79;UBERON:0004535!1.04e-24!110;UBERON:0001009!1.28e-23!113;UBERON:0003914!1.34e-22!118;UBERON:0000947!1.90e-19!21;UBERON:0010191!1.90e-19!21;UBERON:0004290!1.75e-16!70;UBERON:0000486!1.79e-16!82;UBERON:0000914!3.66e-16!83;UBERON:0002329!3.66e-16!83;UBERON:0003077!3.66e-16!83;UBERON:0003059!3.66e-16!83;UBERON:0007282!3.66e-16!83;UBERON:0009618!3.66e-16!83;UBERON:0007285!3.66e-16!83;UBERON:0001134!1.25e-13!61;UBERON:0002036!1.25e-13!61;UBERON:0003082!1.25e-13!61;UBERON:0000490!2.22e-13!138;UBERON:0002385!6.33e-13!63;UBERON:0001015!6.33e-13!63;UBERON:0000383!6.33e-13!63;UBERON:0004111!1.18e-11!241;UBERON:0000477!1.59e-10!286;UBERON:0003915!3.88e-10!9;UBERON:0004700!3.88e-10!9;UBERON:0001917!3.88e-10!9;UBERON:0004237!4.12e-10!10;UBERON:0004695!4.12e-10!10;UBERON:0002111!4.12e-10!10;UBERON:0004178!4.12e-10!10;UBERON:0003102!5.57e-10!95;UBERON:0005256!7.24e-10!143;UBERON:0000483!2.69e-09!309;UBERON:0000119!4.99e-09!312;UBERON:0000025!6.11e-09!194;UBERON:0002199!8.04e-09!45;UBERON:0002416!8.04e-09!45;UBERON:0001986!3.19e-08!18;UBERON:0004638!3.19e-08!18;UBERON:0004852!3.19e-08!18;UBERON:0002097!4.03e-08!40;UBERON:0000992!9.63e-08!13;UBERON:0001310!1.50e-07!4;UBERON:0001828!1.60e-07!8;UBERON:0001135!1.65e-07!15;UBERON:0000415!1.76e-07!4;UBERON:0007240!1.76e-07!4;UBERON:0005742!1.76e-07!4;UBERON:0005734!1.76e-07!4;UBERON:0004664!1.76e-07!4;UBERON:0004663!1.76e-07!4;UBERON:0000487!2.06e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.23e-41;42!UBERON:0003509;8.23e-41;42!UBERON:0004572;8.23e-41;42!UBERON:0004573;1.33e-38;33!UBERON:0004571;1.33e-38;33!UBERON:0000947;7.03e-23;21!UBERON:0010191;7.03e-23;21!UBERON:0007500;1.07e-22;56!UBERON:0001981;1.07e-22;56!UBERON:0004537;1.07e-22;56!UBERON:0000055;1.63e-21;65!UBERON:0002049;3.10e-16;75!UBERON:0007798;3.10e-16;75!UBERON:0003914;3.85e-16;74!UBERON:0001310;3.67e-13;4!UBERON:0004797;5.42e-13;4!UBERON:0000415;5.42e-13;4!UBERON:0007240;5.42e-13;4!UBERON:0005742;5.42e-13;4!UBERON:0005734;5.42e-13;4!UBERON:0004664;5.42e-13;4!UBERON:0004663;5.42e-13;4!UBERON:0003834;1.41e-11;5!UBERON:0001533;1.41e-11;5!UBERON:0004237;2.11e-11;10!UBERON:0004695;2.11e-11;10!UBERON:0002111;2.11e-11;10!UBERON:0004178;2.11e-11;10!UBERON:0003498;6.94e-11;3!UBERON:0005985;6.94e-11;3!UBERON:0001621;6.94e-11;3!UBERON:0004535;3.85e-09;109!UBERON:0001009;3.90e-09;112!UBERON:0000025;2.42e-08;93!UBERON:0003513;3.03e-08;7!UBERON:0000948;4.45e-08;22!UBERON:0002456;4.63e-08;2!UBERON:0001135;2.42e-07;15!UBERON:0007100;6.07e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.57e-54,42;UBERON:0003509,7.57e-54,42;UBERON:0004572,7.57e-54,42;UBERON:0000055,5.76e-43,68;UBERON:0004573,7.67e-43,33;UBERON:0004571,7.67e-43,33;UBERON:0007500,9.67e-42,59;UBERON:0001981,9.67e-42,59;UBERON:0004537,9.67e-42,59;UBERON:0006965,9.67e-42,59;UBERON:0004872,9.52e-39,83;UBERON:0002049,2.68e-36,78;UBERON:0007798,2.68e-36,78;UBERON:0004535,8.43e-33,109;UBERON:0001009,1.19e-31,112;UBERON:0003914,2.26e-26,117;UBERON:0000947,6.50e-23,21;UBERON:0010191,6.50e-23,21;UBERON:0002329,4.84e-22,71;UBERON:0003059,4.84e-22,71;UBERON:0007282,4.84e-22,71;UBERON:0004290,4.84e-22,71;UBERON:0009618,4.84e-22,71;UBERON:0003077,1.22e-21,72;UBERON:0007285,1.22e-21,72;UBERON:0007524,2.98e-21,73;UBERON:0007503,3.61e-21,78;UBERON:0001134,4.96e-18,62;UBERON:0002036,4.96e-18,62;UBERON:0003082,4.96e-18,62;UBERON:0000486,6.99e-18,83;UBERON:0002385,2.72e-17,64;UBERON:0001015,2.72e-17,64;UBERON:0000383,2.72e-17,64;UBERON:0000490,6.33e-15,148;UBERON:0000926,2.90e-13,315;UBERON:0004120,2.90e-13,315;UBERON:0006603,2.90e-13,315;UBERON:0001310,3.80e-13,4;UBERON:0000415,5.19e-13,4;UBERON:0007240,5.19e-13,4;UBERON:0005742,5.19e-13,4;UBERON:0005734,5.19e-13,4;UBERON:0004664,5.19e-13,4;UBERON:0004663,5.19e-13,4;UBERON:0000025,2.39e-12,192;UBERON:0003081,4.04e-12,203;UBERON:0004111,6.76e-12,240;UBERON:0003834,1.43e-11,5;UBERON:0001533,1.43e-11,5;UBERON:0004237,2.20e-11,10;UBERON:0004695,2.20e-11,10;UBERON:0002111,2.20e-11,10;UBERON:0004178,2.20e-11,10;UBERON:0003498,4.23e-11,5;UBERON:0005985,4.23e-11,5;UBERON:0005256,4.24e-11,122;UBERON:0001621,7.07e-11,3;UBERON:0000948,2.40e-09,24;UBERON:0005498,2.40e-09,24;UBERON:0004140,2.40e-09,24;UBERON:0009881,2.40e-09,24;UBERON:0004141,2.40e-09,24;UBERON:0003084,2.40e-09,24;UBERON:0007005,2.40e-09,24;UBERON:0004139,2.40e-09,24;UBERON:0004291,2.40e-09,24;UBERON:0000483,3.13e-09,306;UBERON:0000119,4.83e-09,309;UBERON:0003513,3.07e-08,7;UBERON:0007100,4.10e-08,27;UBERON:0002456,4.63e-08,2;UBERON:0004797,1.95e-07,7;UBERON:0001135,2.48e-07,15;UBERON:0003104,5.39e-07,160;UBERON:0009142,5.39e-07,160 | |||
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|short_description=p@chr11:102667504..102667527,- | |||
}} | }} |
Latest revision as of 17:31, 23 July 2015
Short description: | p@chr11:102667504..102667527, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102667504..102667527, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.43e-37 | 32 |
smooth muscle cell | 1.53e-28 | 43 |
smooth muscle myoblast | 1.53e-28 | 43 |
muscle cell | 4.75e-21 | 55 |
muscle precursor cell | 1.15e-19 | 58 |
myoblast | 1.15e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.15e-19 | 58 |
electrically responsive cell | 2.03e-18 | 61 |
electrically active cell | 2.03e-18 | 61 |
mesodermal cell | 3.57e-17 | 121 |
smooth muscle cell of the umbilical artery | 3.80e-13 | 4 |
fibroblast of tunica adventitia of artery | 5.19e-13 | 4 |
fibroblast of the aortic adventitia | 5.19e-13 | 4 |
cardiocyte | 9.69e-12 | 16 |
smooth muscle cell of the subclavian artery | 1.43e-11 | 5 |
aortic smooth muscle cell | 2.20e-11 | 10 |
smooth muscle cell of the coronary artery | 7.07e-11 | 3 |
embryonic cell | 2.32e-09 | 250 |
endothelial cell of vascular tree | 2.09e-08 | 24 |
smooth muscle cell of the internal thoracic artery | 4.63e-08 | 2 |
cardiac mesenchymal cell | 5.91e-08 | 4 |
migratory trunk neural crest cell | 5.91e-08 | 4 |
somatic stem cell | 1.43e-07 | 433 |
multi fate stem cell | 2.73e-07 | 427 |
subcutaneous preadipocyte | 2.76e-07 | 2 |
stem cell | 3.18e-07 | 441 |
Ontology term | p-value | n |
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