FFCP PHASE1:Hg19::chr11:111225198..111225226,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:111225198..111225226,- | |||
|coexpression_cluster_id=C442 | |||
|description=CAGE_peak_at_chr11:111225198..111225226,- | |||
|id=chr11:111225198..111225226,- | |||
|ontology_enrichment_celltype=CL:0000945!3.82e-58!24;CL:0000826!3.82e-58!24;CL:0000542!3.91e-34!53;CL:0000051!3.91e-34!53;CL:0000838!6.96e-32!52;CL:0000236!1.02e-24!14;CL:0002087!2.37e-15!119;CL:0000817!2.69e-12!3;CL:0000738!4.59e-12!140;CL:0002031!5.11e-12!124;CL:0000785!5.89e-09!2;CL:0000955!5.89e-09!2;CL:0000818!5.89e-09!2;CL:0000954!5.89e-09!2;CL:0000816!5.89e-09!2;CL:0000037!1.23e-08!172;CL:0000566!1.23e-08!172;CL:0002032!2.05e-08!165;CL:0000837!2.05e-08!165;CL:0000988!7.96e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.72e-102;24!CL:0000542;2.36e-26;53!CL:0000236;2.49e-23;13!CL:0000785;1.65e-10;1!CL:0000819;1.65e-10;1!CL:0000946;1.98e-10;1!CL:0000786;1.98e-10;1!CL:0000817;8.61e-10;1!CL:0002087;2.02e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.06e-101,24;CL:0000826,1.06e-101,24;CL:0000838,1.58e-45,52;CL:0000542,1.28e-44,53;CL:0000051,1.28e-44,53;CL:0000236,1.70e-29,14;CL:0000817,3.56e-27,3;CL:0000785,3.43e-19,2;CL:0000955,3.43e-19,2;CL:0000818,3.43e-19,2;CL:0000954,3.43e-19,2;CL:0000816,3.43e-19,2;CL:0002087,7.17e-19,115;CL:0002031,5.67e-18,120;CL:0000738,1.55e-15,136;CL:0002032,1.09e-12,161;CL:0000837,1.09e-12,161;CL:0000037,4.82e-12,168;CL:0000988,2.75e-11,177;CL:0000819,1.65e-10,1;CL:0000946,1.98e-10,1;CL:0000786,1.98e-10,1;CL:0000980,1.98e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.36e-26;53!CL:0000954;3.43e-19;2!UBERON:0001045;8.61e-10;1!UBERON:0006298;8.61e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!1.73e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.59e-31;10!DOID:0060073;1.65e-10;1!DOID:8675;1.65e-10;1!DOID:4960;2.84e-10;1!DOID:0070004;2.84e-10;1!DOID:630;4.64e-10;1!DOID:0050177;4.64e-10;1!DOID:0050427;4.64e-10;1!DOID:2355;4.64e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.29e-31,10;DOID:0060073,1.65e-10,1;DOID:8675,1.65e-10,1;DOID:4960,3.40e-10,1;DOID:0070004,3.40e-10,1;DOID:2355,4.44e-10,1;DOID:2531,4.64e-10,51;DOID:0060083,4.64e-10,51;DOID:630,5.30e-10,1;DOID:0050177,5.30e-10,1;DOID:0050427,5.30e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.49e-11!3;UBERON:0004854!1.49e-11!3;UBERON:0009034!1.49e-11!3;UBERON:0002095!1.49e-11!3;UBERON:0004782!1.49e-11!3;UBERON:0003281!1.49e-11!3;UBERON:0009664!1.49e-11!3;UBERON:0002296!1.49e-11!3;UBERON:0005602!1.49e-11!3;UBERON:0001179!1.49e-11!3;UBERON:0006293!1.49e-11!3;UBERON:0007023!4.99e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.54e-12;3!UBERON:0002372;8.61e-10;1!UBERON:0001154;8.61e-10;1!UBERON:0001736;8.61e-10;1!UBERON:0001153;8.61e-10;1!UBERON:0009854;8.61e-10;1!UBERON:0001961;8.61e-10;1!UBERON:0001744;8.61e-10;1!UBERON:0001042;8.61e-10;1!UBERON:0001735;8.61e-10;1!UBERON:0004177;7.13e-08;5!UBERON:0005057;7.13e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.12e-12,3;UBERON:0004854,1.12e-12,3;UBERON:0009034,1.12e-12,3;UBERON:0002095,1.12e-12,3;UBERON:0004782,1.12e-12,3;UBERON:0003281,1.12e-12,3;UBERON:0009664,1.12e-12,3;UBERON:0002296,1.12e-12,3;UBERON:0005602,1.12e-12,3;UBERON:0001179,1.12e-12,3;UBERON:0006293,1.12e-12,3;UBERON:0001154,7.55e-10,1;UBERON:0001153,7.55e-10,1;UBERON:0001045,7.55e-10,1;UBERON:0001736,8.24e-10,1;UBERON:0006298,8.24e-10,1;UBERON:0002372,1.17e-09,1;UBERON:0001961,1.17e-09,1;UBERON:0001744,1.17e-09,1;UBERON:0001735,1.17e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,2.13461532569859,4.25038219093868,0,0,0,0,0,0,3.17615522379237,2.55904618477359,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.853460445133014,0,0,0.661044872784862,0.954053754535364,1.1384259382189,1.17447437874188,2.6759125968766,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.589211814949674,0,0.541607727530031,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0.743212700502875,1.298422916788,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,2.33861130376032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,6.02100804411698,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,2.37085329784197,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,3.35939774226505,4.62811873847405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09986963389468,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26365753956383,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0.154348316215889,0,0,0,0,0,0,0,0,1.69171052363736,0.128915775947154,3.59788161329744,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01028079521881,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.805095174364105,2.24397944612263 | |||
|short_description=p@chr11:111225198..111225226,- | |||
}} |
Latest revision as of 18:04, 23 July 2015
Short description: | p@chr11:111225198..111225226, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111225198..111225226, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.06e-101 | 24 |
pro-B cell | 1.06e-101 | 24 |
lymphoid lineage restricted progenitor cell | 1.58e-45 | 52 |
lymphocyte | 1.28e-44 | 53 |
common lymphoid progenitor | 1.28e-44 | 53 |
B cell | 1.70e-29 | 14 |
precursor B cell | 3.56e-27 | 3 |
mature B cell | 3.43e-19 | 2 |
pre-B-II cell | 3.43e-19 | 2 |
transitional stage B cell | 3.43e-19 | 2 |
small pre-B-II cell | 3.43e-19 | 2 |
immature B cell | 3.43e-19 | 2 |
nongranular leukocyte | 7.17e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.67e-18 | 120 |
leukocyte | 1.55e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.09e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-12 | 161 |
hematopoietic stem cell | 4.82e-12 | 168 |
hematopoietic cell | 2.75e-11 | 177 |
B-1 B cell | 1.65e-10 | 1 |
antibody secreting cell | 1.98e-10 | 1 |
plasma cell | 1.98e-10 | 1 |
plasmablast | 1.98e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.12e-12 | 3 |
gastrointestinal system mesentery | 1.12e-12 | 3 |
stomach region | 1.12e-12 | 3 |
mesentery | 1.12e-12 | 3 |
gastrointestinal system serosa | 1.12e-12 | 3 |
mesentery of stomach | 1.12e-12 | 3 |
gut mesentery | 1.12e-12 | 3 |
dorsal mesentery | 1.12e-12 | 3 |
dorsal mesogastrium | 1.12e-12 | 3 |
peritoneal cavity | 1.12e-12 | 3 |
spleen primordium | 1.12e-12 | 3 |
vermiform appendix | 7.55e-10 | 1 |
caecum | 7.55e-10 | 1 |
midgut | 7.55e-10 | 1 |
submandibular gland | 8.24e-10 | 1 |
submandibular gland primordium | 8.24e-10 | 1 |
tonsil | 1.17e-09 | 1 |
mucosa-associated lymphoid tissue | 1.17e-09 | 1 |
lymphoid tissue | 1.17e-09 | 1 |
tonsillar ring | 1.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.29e-31 | 10 |
lymphatic system cancer | 1.65e-10 | 1 |
lymphosarcoma | 1.65e-10 | 1 |
bone marrow cancer | 3.40e-10 | 1 |
myeloma | 3.40e-10 | 1 |
anemia | 4.44e-10 | 1 |
hematologic cancer | 4.64e-10 | 51 |
immune system cancer | 4.64e-10 | 51 |
genetic disease | 5.30e-10 | 1 |
monogenic disease | 5.30e-10 | 1 |
xeroderma pigmentosum | 5.30e-10 | 1 |