FFCP PHASE1:Hg19::chr11:134146589..134146608,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:134146589..134146608,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr11:134146589..134146608,- | |description=CAGE_peak_at_chr11:134146589..134146608,- | ||
|id=chr11:134146589..134146608,- | |id=chr11:134146589..134146608,- | ||
|ontology_enrichment_celltype=CL:0002322;2.56e-89;5!CL:0002321;5.01e-30;15!CL:0000540;4.70e-28;6!CL:0000404;4.70e-28;6!CL:0000148;9.55e-17;10!CL:0000147;3.72e-12;14!CL:0000710;1.08e-08;20!CL:0002328;2.97e-07;3 | |ontology_enrichment_celltype=CL:0002322!4.06e-15!5;CL:0000221!7.43e-10!71;CL:0002368!2.07e-09!13;CL:0002077!2.96e-09!33;CL:0002159!3.00e-09!13;CL:0000312!1.91e-08!5;CL:0000362!5.06e-08!8;CL:0000240!4.91e-07!6;CL:0000311!4.91e-07!6;CL:0000079!4.91e-07!6;CL:0000237!4.91e-07!6;CL:0000036!4.91e-07!6;CL:0000357!4.91e-07!6;CL:0000114!4.91e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;2.56e-89;5!CL:0002321;5.01e-30;15!CL:0000540;4.70e-28;6!CL:0000404;4.70e-28;6!CL:0000148;9.55e-17;10!CL:0000147;3.72e-12;14!CL:0000710;1.08e-08;20!CL:0002328;2.97e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.94e-89,5;CL:0000540,4.92e-28,6;CL:0000031,4.92e-28,6;CL:0000404,4.92e-28,6;CL:0000047,3.20e-21,8;CL:0000148,9.05e-17,10;CL:0000541,9.05e-17,10;CL:0000147,3.58e-12,14;CL:0000133,1.46e-10,59;CL:0000710,1.05e-08,20;CL:0000221,1.12e-08,72;CL:0002328,3.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;4.70e-28;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000922;4.40e-08;49!UBERON:0004815;2.97e-07;3!UBERON:0002031;2.97e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.19e-16!94;UBERON:0001016!7.19e-16!94;UBERON:0005743!1.42e-11!86;UBERON:0001017!2.60e-11!82;UBERON:0000473!5.11e-11!8;UBERON:0001049!8.29e-11!57;UBERON:0005068!8.29e-11!57;UBERON:0006241!8.29e-11!57;UBERON:0007135!8.29e-11!57;UBERON:0004121!9.10e-11!169;UBERON:0000200!1.07e-10!6;UBERON:0000924!2.56e-10!173;UBERON:0006601!2.56e-10!173;UBERON:0002616!2.70e-10!59;UBERON:0000955!4.62e-09!69;UBERON:0006238!4.62e-09!69;UBERON:0007023!6.13e-09!115;UBERON:0002780!1.46e-08!41;UBERON:0001890!1.46e-08!41;UBERON:0006240!1.46e-08!41;UBERON:0003080!2.72e-08!42;UBERON:0002771!3.87e-08!3;UBERON:0001950!4.74e-08!20;UBERON:0003135!8.12e-08!11;UBERON:0001893!1.07e-07!34;UBERON:0003075!2.21e-07!86;UBERON:0007284!2.21e-07!86;UBERON:0000010!2.78e-07!8;UBERON:0002619!3.29e-07!22;UBERON:0001869!5.56e-07!32;UBERON:0002346!7.48e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.40e-08;49!UBERON:0004815;2.97e-07;3!UBERON:0002031;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.16e-07,3;UBERON:0002031,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,4.02513230227665,3.71083351300159,1.85910308591229,1.24393266018445,2.01856680700503,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.567100388969546,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46560704781065,6.60189295666722,3.32352270423348,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0.127894371303652,0.431299245586727,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.328863867814245,0,0,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.473328002922261,0.596493833314104,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,1.87052183685892,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,4.02513230227665,3.71083351300159,1.85910308591229,1.24393266018445,2.01856680700503,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.567100388969546,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46560704781065,6.60189295666722,3.32352270423348,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0.127894371303652,0.431299245586727,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.328863867814245,0,0,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.473328002922261,0.596493833314104,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,1.87052183685892,0.0918948995348449,0,0.0757786982182394,0.267964130156178,0.829169439458779,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:134146589..134146608,- | |short_description=p@chr11:134146589..134146608,- | ||
}} | }} |
Latest revision as of 20:12, 23 July 2015
Short description: | p@chr11:134146589..134146608, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:134146589..134146608, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.94e-89 | 5 |
neuron | 4.92e-28 | 6 |
neuroblast | 4.92e-28 | 6 |
electrically signaling cell | 4.92e-28 | 6 |
neuronal stem cell | 3.20e-21 | 8 |
melanocyte | 9.05e-17 | 10 |
melanoblast | 9.05e-17 | 10 |
pigment cell | 3.58e-12 | 14 |
neurectodermal cell | 1.46e-10 | 59 |
neurecto-epithelial cell | 1.05e-08 | 20 |
ectodermal cell | 1.12e-08 | 72 |
bronchial epithelial cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 3.16e-07 | 3 |
epithelium of bronchus | 3.16e-07 | 3 |