FFCP PHASE1:Hg19::chr11:393795..393799,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:393795..393799,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr11:393795..393799,- | |description=CAGE_peak_at_chr11:393795..393799,- | ||
|id=chr11:393795..393799,- | |id=chr11:393795..393799,- | ||
|ontology_enrichment_celltype=CL:0000066!8.82e-22!254;CL:0002076!3.65e-11!43;CL:0002368!4.73e-09!13;CL:0002202!1.05e-08!9;CL:0002632!1.05e-08!9;CL:0000039!2.43e-08!7;CL:0000586!2.43e-08!7;CL:0000223!4.74e-08!59;CL:0002327!1.01e-07!4;CL:0000244!1.68e-07!4;CL:0000731!1.68e-07!4 | |ontology_enrichment_celltype=CL:0000066!8.82e-22!254;CL:0002076!3.65e-11!43;CL:0002368!4.73e-09!13;CL:0002202!1.05e-08!9;CL:0002632!1.05e-08!9;CL:0000039!2.43e-08!7;CL:0000586!2.43e-08!7;CL:0000223!4.74e-08!59;CL:0002327!1.01e-07!4;CL:0000244!1.68e-07!4;CL:0000731!1.68e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.96e-14;4!CL:0000244;9.41e-14;4!CL:0000731;9.41e-14;4!CL:0002328;4.79e-09;3!CL:1001319;1.49e-07;1!CL:1000600;1.49e-07;1!CL:0002336;4.60e-07;1!CL:0002261;4.60e-07;1!CL:0002170;4.60e-07;1!CL:0000313;4.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.37e-17,253;CL:0002327,2.37e-14,4;CL:0000244,8.26e-14,4;CL:0000731,8.26e-14,4;CL:0000076,1.99e-11,63;CL:0002328,4.99e-09,3;CL:0002076,5.45e-08,42;CL:1001319,1.44e-07,1;CL:1000600,1.44e-07,1;CL:0002336,4.89e-07,1;CL:0002261,4.89e-07,1;CL:0002170,4.89e-07,1;CL:0000313,5.19e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.24e-09;10!UBERON:0005564;2.24e-09;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.88e-23!143;DOID:305!3.52e-23!106;DOID:1749!5.08e-17!14;DOID:162!9.69e-17!235;DOID:14566!1.27e-16!239;DOID:299!9.17e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.03e-34;14!DOID:3151;4.60e-07;1!DOID:3111;4.60e-07;1!DOID:2152;4.60e-07;1!DOID:3149;4.60e-07;1!DOID:3603;4.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.93e-34,14;DOID:305,9.88e-13,106;DOID:0050687,9.81e-10,143;DOID:2152,5.19e-07,1;DOID:3111,6.57e-07,1;DOID:3603,6.57e-07,1;DOID:3151,7.40e-07,1;DOID:3149,7.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003729!2.21e-09!5;UBERON:0000365!3.82e-09!5;UBERON:0000344!1.84e-08!12;UBERON:0003343!6.98e-08!4;UBERON:0004785!6.98e-08!4;UBERON:0001911!1.01e-07!4;UBERON:0005333!1.01e-07!4;UBERON:0008425!1.01e-07!4;UBERON:0005311!1.01e-07!4;UBERON:0005910!1.69e-07!6;UBERON:0000974!5.13e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.23e-19;5!UBERON:0005910;4.77e-16;6!UBERON:0003343;2.37e-14;4!UBERON:0004785;2.37e-14;4!UBERON:0001911;2.96e-14;4!UBERON:0000344;2.86e-10;20!UBERON:0000974;9.91e-10;6!UBERON:0004815;4.79e-09;3!UBERON:0002031;4.79e-09;3!UBERON:0000486;4.35e-08;12!UBERON:0003729;1.45e-07;13!UBERON:0004645;1.49e-07;1!UBERON:0001256;1.49e-07;1!UBERON:0001259;1.49e-07;1!UBERON:0004911;4.60e-07;1!UBERON:0004913;4.60e-07;1!UBERON:0003703;4.60e-07;1!UBERON:0001174;4.60e-07;1!UBERON:0004914;4.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.75e-19,5;UBERON:0005910,4.17e-16,6;UBERON:0003343,2.17e-14,4;UBERON:0004785,2.17e-14,4;UBERON:0001911,2.37e-14,4;UBERON:0005333,2.37e-14,4;UBERON:0008425,2.37e-14,4;UBERON:0005311,2.37e-14,4;UBERON:0000344,3.09e-10,20;UBERON:0004815,4.99e-09,3;UBERON:0002031,4.99e-09,3;UBERON:0003729,1.42e-07,13;UBERON:0004645,1.44e-07,1;UBERON:0001256,1.44e-07,1;UBERON:0001259,1.44e-07,1;UBERON:0000076,2.10e-07,8;UBERON:0004913,2.84e-07,1;UBERON:0003703,2.84e-07,1;UBERON:0001174,2.84e-07,1;UBERON:0004914,2.84e-07,1;UBERON:0004911,5.19e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.10844143144775,0.739508020333575,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.132529768321485,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.502644862058154,1.574003567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,2.5971971583826,2.90633938513962,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,3.26672954583968,0,0.43050537267123,1.68471475667626,1.7737206141467,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.398495976502139,0,0.251932747854276,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0.437299999980979,0,6.71381344884448,0.508507300585533,0,0.344743373241465,0,0,0,0,0,0,0,0,0.435753854075961,0.83654246567162,0.0769502585037971,0,0.23056390438806,0.807818799687949,0.54323685961004,0,0,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,1.46909527343233,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0.587954384486266,2.61177619741208,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.561111741760736,0,0,0,0.114536596165916,0,0.288109595976299,0,0.707082103850386,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0.412618309791701,0,0,0,0,1.0063040627978,0,0,0.316801009558219,0,2.1110671705139,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,5.10673006216145,0,0,0,0,0,0,0,0,0,0,0,0,2.12466693535581,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,1.70254786070051,0,0,1.86623178009892,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,10.7352448246444,4.76914356156365,1.73288499225507,0,0,0,0,0,0,0,0.655087670040387,1.92212912082159,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,1.8328549483524,0,0,1.56597604516909,0.392600934460972,0.975343399858155,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,5.17806421956407,14.4686897403434,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,1.83579893535567,0,0.827054095813604,1.75495277504663,0,0.267964130156178,0,0,0.213233981900981,0,0.129177819672012,0,0,0,0,0,0.342233301085281,0,0,0,3.41893728166093,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.10844143144775,0.739508020333575,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.132529768321485,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.502644862058154,1.574003567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,2.5971971583826,2.90633938513962,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,3.26672954583968,0,0.43050537267123,1.68471475667626,1.7737206141467,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.398495976502139,0,0.251932747854276,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0,0.437299999980979,0,6.71381344884448,0.508507300585533,0,0.344743373241465,0,0,0,0,0,0,0,0,0.435753854075961,0.83654246567162,0.0769502585037971,0,0.23056390438806,0.807818799687949,0.54323685961004,0,0,0.533034776018635,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,0,1.46909527343233,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0.587954384486266,2.61177619741208,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.561111741760736,0,0,0,0.114536596165916,0,0.288109595976299,0,0.707082103850386,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0.412618309791701,0,0,0,0,1.0063040627978,0,0,0.316801009558219,0,2.1110671705139,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,5.10673006216145,0,0,0,0,0,0,0,0,0,0,0,0,2.12466693535581,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,1.70254786070051,0,0,1.86623178009892,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,10.7352448246444,4.76914356156365,1.73288499225507,0,0,0,0,0,0,0,0.655087670040387,1.92212912082159,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,1.8328549483524,0,0,1.56597604516909,0.392600934460972,0.975343399858155,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,5.17806421956407,14.4686897403434,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,1.83579893535567,0,0.827054095813604,1.75495277504663,0,0.267964130156178,0,0,0.213233981900981,0,0.129177819672012,0,0,0,0,0,0.342233301085281,0,0,0,3.41893728166093,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr11:393795..393799,- | |short_description=p@chr11:393795..393799,- | ||
}} | }} |
Latest revision as of 22:08, 23 July 2015
Short description: | p@chr11:393795..393799, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:393795..393799, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.37e-17 | 253 |
mammary gland epithelial cell | 2.37e-14 | 4 |
transitional epithelial cell | 8.26e-14 | 4 |
urothelial cell | 8.26e-14 | 4 |
squamous epithelial cell | 1.99e-11 | 63 |
bronchial epithelial cell | 4.99e-09 | 3 |
endo-epithelial cell | 5.45e-08 | 42 |
bladder cell | 1.44e-07 | 1 |
lower urinary tract cell | 1.44e-07 | 1 |
buccal mucosa cell | 4.89e-07 | 1 |
endothelial cell of viscerocranial mucosa | 4.89e-07 | 1 |
keratinized cell of the oral mucosa | 4.89e-07 | 1 |
serous secreting cell | 5.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.75e-19 | 5 |
transitional epithelium | 4.17e-16 | 6 |
mucosa of oral region | 2.17e-14 | 4 |
respiratory system mucosa | 2.17e-14 | 4 |
mammary gland | 2.37e-14 | 4 |
mammary bud | 2.37e-14 | 4 |
mammary ridge | 2.37e-14 | 4 |
mammary placode | 2.37e-14 | 4 |
mucosa | 3.09e-10 | 20 |
lower respiratory tract epithelium | 4.99e-09 | 3 |
epithelium of bronchus | 4.99e-09 | 3 |
mouth mucosa | 1.42e-07 | 13 |
urinary bladder urothelium | 1.44e-07 | 1 |
wall of urinary bladder | 1.44e-07 | 1 |
mucosa of urinary bladder | 1.44e-07 | 1 |
external ectoderm | 2.10e-07 | 8 |
hepatopancreatic ampulla | 2.84e-07 | 1 |
extrahepatic bile duct | 2.84e-07 | 1 |
common bile duct | 2.84e-07 | 1 |
duodenal papilla | 2.84e-07 | 1 |
epithelium of female gonad | 5.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.93e-34 | 14 |
carcinoma | 9.88e-13 | 106 |
cell type cancer | 9.81e-10 | 143 |
ovary epithelial cancer | 5.19e-07 | 1 |
cystadenocarcinoma | 6.57e-07 | 1 |
mucinous cystadenocarcinoma | 6.57e-07 | 1 |
skin squamous cell carcinoma | 7.40e-07 | 1 |
keratoacanthoma | 7.40e-07 | 1 |