FFCP PHASE1:Hg19::chr11:4111694..4111720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:4111694..4111720,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr11:4111694..4111720,+ | |description=CAGE_peak_at_chr11:4111694..4111720,+ | ||
|id=chr11:4111694..4111720,+ | |id=chr11:4111694..4111720,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.26e-28!25;CL:0000827!1.26e-28!25;CL:0000791!2.47e-27!18;CL:0000789!2.47e-27!18;CL:0002420!2.47e-27!18;CL:0002419!2.47e-27!18;CL:0000790!2.47e-27!18;CL:0000624!3.72e-20!6;CL:0000838!3.24e-19!52;CL:0000542!9.36e-19!53;CL:0000051!9.36e-19!53;CL:0000625!9.20e-13!11;CL:0000898!3.64e-11!3;CL:0000623!4.52e-10!3;CL:0000825!4.52e-10!3;CL:0000767!5.99e-10!3;CL:0000738!2.56e-09!140;CL:0002087!4.26e-08!119;CL:0000815!4.60e-08!2;CL:0000792!4.60e-08!2;CL:0002677!4.60e-08!2 | |ontology_enrichment_celltype=CL:0000084!1.26e-28!25;CL:0000827!1.26e-28!25;CL:0000791!2.47e-27!18;CL:0000789!2.47e-27!18;CL:0002420!2.47e-27!18;CL:0002419!2.47e-27!18;CL:0000790!2.47e-27!18;CL:0000624!3.72e-20!6;CL:0000838!3.24e-19!52;CL:0000542!9.36e-19!53;CL:0000051!9.36e-19!53;CL:0000625!9.20e-13!11;CL:0000898!3.64e-11!3;CL:0000623!4.52e-10!3;CL:0000825!4.52e-10!3;CL:0000767!5.99e-10!3;CL:0000738!2.56e-09!140;CL:0002087!4.26e-08!119;CL:0000815!4.60e-08!2;CL:0000792!4.60e-08!2;CL:0002677!4.60e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.20e-33;6!CL:0000898;5.83e-25;3!CL:0000815;2.25e-17;2!CL:0000792;2.25e-17;2!CL:0002677;2.25e-17;2!CL:0000084;4.53e-11;25!CL:0000791;4.59e-11;18!CL:0000789;4.59e-11;18!CL:0002419;4.59e-11;18!CL:0000895;2.35e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.93e-33,6;CL:0000898,4.95e-25,3;CL:0000815,1.91e-17,2;CL:0000792,1.91e-17,2;CL:0002677,1.91e-17,2;CL:0000791,4.40e-11,18;CL:0000789,4.40e-11,18;CL:0002420,4.40e-11,18;CL:0002419,4.40e-11,18;CL:0000790,4.40e-11,18;CL:0000084,4.66e-11,25;CL:0000827,4.66e-11,25;CL:0000810,2.35e-09,1;CL:0000895,2.35e-09,1;CL:0002436,2.35e-09,1;CL:0002427,2.35e-09,1;CL:0002428,2.35e-09,1;CL:0002429,2.35e-09,1;CL:0002433,2.35e-09,1;CL:0002431,2.35e-09,1;CL:0002432,2.35e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000790;4.59e-11;18!CL:0002427;2.35e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;4.32e-09;1!UBERON:0000026;4.32e-09;1!UBERON:0008784;4.32e-09;1!UBERON:0006058;4.32e-09;1!UBERON:0003663;4.32e-09;1!UBERON:0004256;4.32e-09;1!UBERON:0004708;4.32e-09;1!UBERON:0002101;4.32e-09;1!UBERON:0004709;4.32e-09;1!UBERON:0002529;4.32e-09;1!UBERON:0010538;4.32e-09;1!UBERON:0003661;4.32e-09;1!UBERON:0010890;4.32e-09;1!UBERON:0002471;4.32e-09;1!UBERON:0001383;4.32e-09;1!UBERON:0010758;4.32e-09;1!UBERON:0010707;4.32e-09;1!UBERON:0000978;4.32e-09;1!UBERON:0002103;4.32e-09;1!UBERON:0001665;4.32e-09;1!UBERON:0003823;4.32e-09;1!UBERON:0000154;4.32e-09;1!UBERON:0010709;4.32e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.50e-09,1;UBERON:0001389,4.50e-09,1;UBERON:0000026,4.50e-09,1;UBERON:0008784,4.50e-09,1;UBERON:0006058,4.50e-09,1;UBERON:0003663,4.50e-09,1;UBERON:0004256,4.50e-09,1;UBERON:0004708,4.50e-09,1;UBERON:0002101,4.50e-09,1;UBERON:0004709,4.50e-09,1;UBERON:0002529,4.50e-09,1;UBERON:0010538,4.50e-09,1;UBERON:0003661,4.50e-09,1;UBERON:0010890,4.50e-09,1;UBERON:0002471,4.50e-09,1;UBERON:0001383,4.50e-09,1;UBERON:0004357,4.50e-09,1;UBERON:0004347,4.50e-09,1;UBERON:0005420,4.50e-09,1;UBERON:0005732,4.50e-09,1;UBERON:0010758,4.50e-09,1;UBERON:0010707,4.50e-09,1;UBERON:0000978,4.50e-09,1;UBERON:0002103,4.50e-09,1;UBERON:0001665,4.50e-09,1;UBERON:0003823,4.50e-09,1;UBERON:0000154,4.50e-09,1;UBERON:0010709,4.50e-09,1;UBERON:0005733,4.50e-09,1;UBERON:0005730,4.50e-09,1 | |||
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| ||
|short_description=p@chr11:4111694..4111720,+ | |short_description=p@chr11:4111694..4111720,+ | ||
}} | }} |
Latest revision as of 22:10, 23 July 2015
Short description: | p@chr11:4111694..4111720, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:4111694..4111720, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.93e-33 | 6 |
naive T cell | 4.95e-25 | 3 |
regulatory T cell | 1.91e-17 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.91e-17 | 2 |
naive regulatory T cell | 1.91e-17 | 2 |
mature alpha-beta T cell | 4.40e-11 | 18 |
alpha-beta T cell | 4.40e-11 | 18 |
immature T cell | 4.40e-11 | 18 |
mature T cell | 4.40e-11 | 18 |
immature alpha-beta T cell | 4.40e-11 | 18 |
T cell | 4.66e-11 | 25 |
pro-T cell | 4.66e-11 | 25 |
CD4-positive, alpha-beta thymocyte | 2.35e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.35e-09 | 1 |
mature CD4 single-positive thymocyte | 2.35e-09 | 1 |
resting double-positive thymocyte | 2.35e-09 | 1 |
double-positive blast | 2.35e-09 | 1 |
CD69-positive double-positive thymocyte | 2.35e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.35e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.35e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.35e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.50e-09 | 1 |
soleus muscle | 4.50e-09 | 1 |
appendage | 4.50e-09 | 1 |
lower limb segment | 4.50e-09 | 1 |
multi-limb segment region | 4.50e-09 | 1 |
hindlimb muscle | 4.50e-09 | 1 |
hindlimb zeugopod muscle | 4.50e-09 | 1 |
paired limb/fin | 4.50e-09 | 1 |
limb | 4.50e-09 | 1 |
pelvic appendage | 4.50e-09 | 1 |
limb segment | 4.50e-09 | 1 |
paired limb/fin segment | 4.50e-09 | 1 |
limb muscle | 4.50e-09 | 1 |
pelvic complex muscle | 4.50e-09 | 1 |
zeugopod | 4.50e-09 | 1 |
muscle of leg | 4.50e-09 | 1 |
paired limb/fin bud | 4.50e-09 | 1 |
limb bud | 4.50e-09 | 1 |
pelvic appendage bud | 4.50e-09 | 1 |
limb/fin field | 4.50e-09 | 1 |
subdivision of organism along appendicular axis | 4.50e-09 | 1 |
appendage girdle complex | 4.50e-09 | 1 |
leg | 4.50e-09 | 1 |
hindlimb | 4.50e-09 | 1 |
triceps surae | 4.50e-09 | 1 |
hindlimb zeugopod | 4.50e-09 | 1 |
posterior region of body | 4.50e-09 | 1 |
pelvic complex | 4.50e-09 | 1 |
limb field | 4.50e-09 | 1 |
hindlimb/pelvic fin field | 4.50e-09 | 1 |