FFCP PHASE1:Hg19::chr11:46334157..46334197,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46334157..46334197,+ | |||
|description=CAGE_peak_at_chr11:46334157..46334197,+ | |description=CAGE_peak_at_chr11:46334157..46334197,+ | ||
|id=chr11:46334157..46334197,+ | |id=chr11:46334157..46334197,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-25!180;CL:0000057!1.76e-20!75;CL:0000680!8.04e-12!57;CL:0000056!8.04e-12!57;CL:0000355!8.04e-12!57;CL:0000183!3.83e-11!59;CL:0000187!2.15e-10!54;CL:0000393!2.39e-08!60;CL:0000211!2.39e-08!60;CL:0000144!4.34e-08!625;CL:0000192!5.17e-08!42;CL:0000514!5.17e-08!42;CL:0000048!6.48e-08!430;CL:0002371!6.96e-08!591;CL:0002620!1.12e-07!23;CL:0000723!2.39e-07!436;CL:0000034!6.55e-07!444;CL:0000222!6.87e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.02e-25!180;CL:0000057!1.76e-20!75;CL:0000680!8.04e-12!57;CL:0000056!8.04e-12!57;CL:0000355!8.04e-12!57;CL:0000183!3.83e-11!59;CL:0000187!2.15e-10!54;CL:0000393!2.39e-08!60;CL:0000211!2.39e-08!60;CL:0000144!4.34e-08!625;CL:0000192!5.17e-08!42;CL:0000514!5.17e-08!42;CL:0000048!6.48e-08!430;CL:0002371!6.96e-08!591;CL:0002620!1.12e-07!23;CL:0000723!2.39e-07!436;CL:0000034!6.55e-07!444;CL:0000222!6.87e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002569;9.59e-12;6!CL:0002554;1.14e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,5.57e-12,6;CL:0002554,5.44e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.77e-12!83;UBERON:0002329!5.77e-12!83;UBERON:0003077!5.77e-12!83;UBERON:0003059!5.77e-12!83;UBERON:0007282!5.77e-12!83;UBERON:0009618!5.77e-12!83;UBERON:0007285!5.77e-12!83;UBERON:0002385!6.70e-11!63;UBERON:0001015!6.70e-11!63;UBERON:0000383!6.70e-11!63;UBERON:0001134!2.68e-10!61;UBERON:0002036!2.68e-10!61;UBERON:0003082!2.68e-10!61;UBERON:0004290!3.23e-10!70;UBERON:0005256!2.08e-09!143;UBERON:0000486!7.97e-09!82;UBERON:0003102!1.84e-07!95;UBERON:0000475!3.09e-07!365 | |ontology_enrichment_uberon=UBERON:0000914!5.77e-12!83;UBERON:0002329!5.77e-12!83;UBERON:0003077!5.77e-12!83;UBERON:0003059!5.77e-12!83;UBERON:0007282!5.77e-12!83;UBERON:0009618!5.77e-12!83;UBERON:0007285!5.77e-12!83;UBERON:0002385!6.70e-11!63;UBERON:0001015!6.70e-11!63;UBERON:0000383!6.70e-11!63;UBERON:0001134!2.68e-10!61;UBERON:0002036!2.68e-10!61;UBERON:0003082!2.68e-10!61;UBERON:0004290!3.23e-10!70;UBERON:0005256!2.08e-09!143;UBERON:0000486!7.97e-09!82;UBERON:0003102!1.84e-07!95;UBERON:0000475!3.09e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0003104;3.90e-15;7!UBERON:0009142;3.90e-15;7!UBERON:0003422;9.59e-12;6!UBERON:0002331;4.69e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,5.57e-12,6;UBERON:0002331,3.43e-07,10;UBERON:0000358,3.43e-07,10;UBERON:0000307,3.43e-07,10;UBERON:0000091,3.43e-07,10;UBERON:0000087,3.43e-07,10;UBERON:0007010,3.43e-07,10;UBERON:0007806,3.43e-07,10;UBERON:0008780,3.43e-07,10;UBERON:0005728,3.43e-07,10 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,1.22866968250754,0.697801167972428,0.218441372130172,1.05506791291381,0.247532705920093,0,0.672325146451775,1.80808358407193,0,0,0.123121058076788,0.612002073732759,1.56727360739044,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0.860509862246441,1.06400514659507,0,0,0.74000264525148,0.311211035399766,0,0.163461903113459,0.756787138224657,0,1.64025002283658,0,0,0,0.469737994575059,0.161872944368132,0.280901613404497,0.61246251376468,0.245668634623536,0.826606249406124,1.18800285728205,0.741800787835671,1.82032272387605,5.03032699271367,0.168336113954066,0.375355559615893,0.831192346452549,0.877955241761676,0.30648779579902,0.150238058906597,0.340296549480063,1.4351170855109,0.85422955527427,0.423863802319124,0,0.412210116953756,0.257640540045629,0.930584281657949,1.35021065793013,0.389748020644795,0.252433774244115,0.828449087780694,1.13152239773168,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0.243947412259191,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0,0,0,0,1.3032332212413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,2.05765899409714,0,0.799266537048298,0.428933980974443,10.8524321078289,1.64648067356154,0,0.710783897485092,1.58390374586686,0,0,0.199945982364114,0,0,0,0.239624855491583,2.29723871668228,0,0.579125226670317,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.623912584592421,1.96271887676878,1.26161932027148,0.819989904948992,0,0,0,0.664225598535437,0,0.173767228936166,0.979005787313703,0.686286847621712,0,0,0,0,0,0.604780586659361,0,0.61384789315225,0,0.896974044789907,0,0.64341568457443,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,1.03850885836724,0.232420756919918,0,0,0,0.574072240823034,0.728364672026868,0.917870904715969,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0.984043937099117,0,0,1.64825036673018,0.41254749960294,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0.537101224341368,0.435050081742686,0.0852266274161009,0.178064071293475,0,0,0,0,1.39453664789186,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0.762520775695299,0.767693373934002,0,0,0.78494864019923,0.719489830333259,1.09814811894422,1.41374882814824,0.808729926293264,0,0,3.41343617362713,0.731140468893853,0,1.09199929126389,0.848432591722276,1.13008116620243,0,0,1.31535265576129,6.36653087693356,0,0,0.6196469961995,0,0.430234056612155,0.392996164052485,0,0.354761064070598,0.211107635297664,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0.160317640503067,0,0,0.432271251462318,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,2.17199840701485,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.934853239388898,0,0.189403005275089,0,0.889811221596536,0.457680136793847,0.756154618816195,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0.414706207840855,0,1.5652351854352,0.450772826991655,0.380805212168795,0.406870733204662,0.727394636810238,0.214821114084977,0.464033759878494,0.796191777397232,0.400027764663154,1.37358282073117,0.673498977531838,0,0,0,0,0.680117776536817,2.08370226891451,0.489473409012935,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0.994581110581374,0,1.81534561833168,1.56302802246618,0,0,0,0,0,0.206686796501184,0,0,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|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,1.22866968250754,0.697801167972428,0.218441372130172,1.05506791291381,0.247532705920093,0,0.672325146451775,1.80808358407193,0,0,0.123121058076788,0.612002073732759,1.56727360739044,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0.860509862246441,1.06400514659507,0,0,0.74000264525148,0.311211035399766,0,0.163461903113459,0.756787138224657,0,1.64025002283658,0,0,0,0.469737994575059,0.161872944368132,0.280901613404497,0.61246251376468,0.245668634623536,0.826606249406124,1.18800285728205,0.741800787835671,1.82032272387605,5.03032699271367,0.168336113954066,0.375355559615893,0.831192346452549,0.877955241761676,0.30648779579902,0.150238058906597,0.340296549480063,1.4351170855109,0.85422955527427,0.423863802319124,0,0.412210116953756,0.257640540045629,0.930584281657949,1.35021065793013,0.389748020644795,0.252433774244115,0.828449087780694,1.13152239773168,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0.243947412259191,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0,0,0,0,1.3032332212413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,2.05765899409714,0,0.799266537048298,0.428933980974443,10.8524321078289,1.64648067356154,0,0.710783897485092,1.58390374586686,0,0,0.199945982364114,0,0,0,0.239624855491583,2.29723871668228,0,0.579125226670317,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.623912584592421,1.96271887676878,1.26161932027148,0.819989904948992,0,0,0,0.664225598535437,0,0.173767228936166,0.979005787313703,0.686286847621712,0,0,0,0,0,0.604780586659361,0,0.61384789315225,0,0.896974044789907,0,0.64341568457443,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,1.03850885836724,0.232420756919918,0,0,0,0.574072240823034,0.728364672026868,0.917870904715969,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0.671624264166535,0,0,0,0.984043937099117,0,0,1.64825036673018,0.41254749960294,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0.537101224341368,0.435050081742686,0.0852266274161009,0.178064071293475,0,0,0,0,1.39453664789186,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0.762520775695299,0.767693373934002,0,0,0.78494864019923,0.719489830333259,1.09814811894422,1.41374882814824,0.808729926293264,0,0,3.41343617362713,0.731140468893853,0,1.09199929126389,0.848432591722276,1.13008116620243,0,0,1.31535265576129,6.36653087693356,0,0,0.6196469961995,0,0.430234056612155,0.392996164052485,0,0.354761064070598,0.211107635297664,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0.160317640503067,0,0,0.432271251462318,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,2.17199840701485,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0.934853239388898,0,0.189403005275089,0,0.889811221596536,0.457680136793847,0.756154618816195,0.310874401165561,0,0.159296767163702,0,0.465788870628778,0.414706207840855,0,1.5652351854352,0.450772826991655,0.380805212168795,0.406870733204662,0.727394636810238,0.214821114084977,0.464033759878494,0.796191777397232,0.400027764663154,1.37358282073117,0.673498977531838,0,0,0,0,0.680117776536817,2.08370226891451,0.489473409012935,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0.994581110581374,0,1.81534561833168,1.56302802246618,0,0,0,0,0,0.206686796501184,0,0,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| ||
|short_description=p@chr11:46334157..46334197,+ | |short_description=p@chr11:46334157..46334197,+ | ||
}} | }} |
Latest revision as of 22:24, 23 July 2015
Short description: | p@chr11:46334157..46334197, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46334157..46334197, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 5.57e-12 | 6 |
fibroblast of lymphatic vessel | 5.44e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 5.57e-12 | 6 |
umbilical cord | 3.43e-07 | 10 |
blastocyst | 3.43e-07 | 10 |
blastula | 3.43e-07 | 10 |
bilaminar disc | 3.43e-07 | 10 |
inner cell mass | 3.43e-07 | 10 |
cleaving embryo | 3.43e-07 | 10 |
connecting stalk | 3.43e-07 | 10 |
inner cell mass derived epiblast | 3.43e-07 | 10 |
extraembryonic mesoderm | 3.43e-07 | 10 |