FFCP PHASE1:Hg19::chr11:57465297..57465301,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:57465297..57465301,- to FFCP PHASE1:Hg19::chr11:57465297..57465301,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:57465297..57465301,- | |||
|description=CAGE_peak_at_chr11:57465297..57465301,- | |||
|id=chr11:57465297..57465301,- | |||
|ontology_enrichment_celltype=CL:0000738!9.01e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.54e-24;3!CL:0000791;2.23e-20;18!CL:0000789;2.23e-20;18!CL:0002419;2.23e-20;18!CL:0000084;1.84e-14;25!CL:0000624;4.34e-12;6!CL:0000625;1.15e-11;11!CL:0000511;5.09e-09;1!CL:0002625;5.09e-09;1!CL:0000216;5.09e-09;1!CL:0000542;6.93e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.52e-24,3;CL:0000825,1.52e-24,3;CL:0000791,2.56e-20,18;CL:0000789,2.56e-20,18;CL:0002420,2.56e-20,18;CL:0002419,2.56e-20,18;CL:0000790,2.56e-20,18;CL:0000838,3.39e-16,52;CL:0000542,7.42e-16,53;CL:0000051,7.42e-16,53;CL:0000084,2.04e-14,25;CL:0000827,2.04e-14,25;CL:0000624,4.79e-12,6;CL:0000625,1.22e-11,11;CL:0000511,2.82e-09,1;CL:0002625,2.82e-09,1;CL:0000216,2.82e-09,1;CL:0000738,1.63e-08,136;CL:0002032,5.63e-08,161;CL:0000837,5.63e-08,161;CL:0000037,1.57e-07,168;CL:0002087,1.70e-07,115;CL:0002031,4.23e-07,120;CL:0000988,5.17e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-20;18!UBERON:0005425;5.09e-09;1!CL:0000051;6.93e-09;53 | |||
|ontology_enrichment_disease=DOID:162!2.92e-09!235;DOID:14566!3.24e-09!239;DOID:0050687!6.91e-08!143;DOID:305!1.44e-07!106;DOID:0050686!4.04e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.09e-09;1!UBERON:0000941;5.09e-09;1!UBERON:0001343;5.09e-09;1!UBERON:0001785;5.09e-09;1!UBERON:0002464;5.09e-09;1!UBERON:0004904;5.09e-09;1!UBERON:0001021;5.09e-09;1!UBERON:0004910;5.09e-09;1!UBERON:0004813;5.09e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.82e-09,1;UBERON:0001343,2.82e-09,1;UBERON:0004910,2.82e-09,1;UBERON:0005154,2.82e-09,1;UBERON:0005295,2.82e-09,1;UBERON:0004813,2.82e-09,1;UBERON:0005297,2.82e-09,1;UBERON:0005294,2.82e-09,1;UBERON:0010141,2.82e-09,1;UBERON:0005891,2.82e-09,1;UBERON:0000941,3.31e-09,1;UBERON:0001785,3.31e-09,1;UBERON:0002464,3.31e-09,1;UBERON:0004904,3.31e-09,1;UBERON:0001021,3.31e-09,1;UBERON:0003902,3.31e-09,1;UBERON:0005425,3.31e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,1.15148819429164,0.309632246632152,0,0,0,0.154934401160603,0.426507697462265,0,1.10799081706375,0.802177789880567,0.651032612147555,0,0,0.515151135268373,0.145398238779565,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,1.14681968437569,0,0,0.263384084775077,1.180258620683,1.96505381374582,1.02800749499755,0,0,0.473447805734733,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0.780356085359269,0.164437904603676,0.552700035571697,0,0.444859689486181,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0,0,0.950452044448374,0,0,1.24930726552346,0.236777252044017,0,1.20964045934839,2.13952156626806,2.46201486600758,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,1.37921532141349,3.88129634747131,1.79680250791648,0,0,0,0.167516265334349,1.27587750330633,0.749007023947182,2.99161459204025,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0.533637789017222,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0,0.735120647943095,0,0.432807638929335,0.355709216742071,0,0,0,0,0,0.280797178113459,0.912938716132769,0,0,0,0.481764225311099,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0.242721043499027,0,0.568272293612826,0,0,0.307160702099232,0,0,0.111308705022906,0.329607748453519,1.26675244876796,0,0.276283915531148,0.755798243562828,0.409074730008619,0,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0,0,0.520855522170466,0.699679999969566,0,0.341380344856499,0,0.236387681767936,0.689486746482929,0.583209226766509,0,0,0.120596438625408,0,0,0.295547618953547,0,0.10893846351899,0.41827123283581,0.153900517007594,0.341826167541004,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.104421949505455,0.134802265961354,0,0,0,0.391329237864179,0.485560759068186,0,0,0.30607276163049,0.189559738885464,0.300646838828985,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0.173559738335131,0.195984794828755,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.146178634172371,0,0,0.0882561266915003,0,0,0.19871461170299,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0.229073192331831,0,0.14405479798815,0.248505071130865,0,0.135904206073614,0.313808538937,0.407992870545287,0.866851769704557,0,0.273810757783986,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0.160753148465019,0.137539436597234,0,0.674921674654501,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,1.017074150619,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0,0.342173675768659,0,0.106787412567695,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0.415045904808692,0.124980407962107,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0.132864840313363,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0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| ||
|short_description=p@chr11:57465297..57465301,- | |||
}} | }} |
Latest revision as of 23:02, 23 July 2015
Short description: | p@chr11:57465297..57465301, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57465297..57465301, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.52e-24 | 3 |
pro-NK cell | 1.52e-24 | 3 |
mature alpha-beta T cell | 2.56e-20 | 18 |
alpha-beta T cell | 2.56e-20 | 18 |
immature T cell | 2.56e-20 | 18 |
mature T cell | 2.56e-20 | 18 |
immature alpha-beta T cell | 2.56e-20 | 18 |
lymphoid lineage restricted progenitor cell | 3.39e-16 | 52 |
lymphocyte | 7.42e-16 | 53 |
common lymphoid progenitor | 7.42e-16 | 53 |
T cell | 2.04e-14 | 25 |
pro-T cell | 2.04e-14 | 25 |
CD4-positive, alpha-beta T cell | 4.79e-12 | 6 |
CD8-positive, alpha-beta T cell | 1.22e-11 | 11 |
androgen binding protein secreting cell | 2.82e-09 | 1 |
seminiferous tubule epithelial cell | 2.82e-09 | 1 |
Sertoli cell | 2.82e-09 | 1 |
leukocyte | 1.63e-08 | 136 |
hematopoietic oligopotent progenitor cell | 5.63e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.63e-08 | 161 |
hematopoietic stem cell | 1.57e-07 | 168 |
nongranular leukocyte | 1.70e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 4.23e-07 | 120 |
hematopoietic cell | 5.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.82e-09 | 1 |
seminiferous tubule of testis | 2.82e-09 | 1 |
epithelium of male gonad | 2.82e-09 | 1 |
epithelial cord | 2.82e-09 | 1 |
sex cord | 2.82e-09 | 1 |
seminiferous tubule epithelium | 2.82e-09 | 1 |
testis sex cord | 2.82e-09 | 1 |
genital ridge | 2.82e-09 | 1 |
primitive sex cord of indifferent gonad | 2.82e-09 | 1 |
coelomic epithelium | 2.82e-09 | 1 |
cranial nerve II | 3.31e-09 | 1 |
cranial nerve | 3.31e-09 | 1 |
nerve trunk | 3.31e-09 | 1 |
nerve connecting eye with brain | 3.31e-09 | 1 |
nerve | 3.31e-09 | 1 |
retinal neural layer | 3.31e-09 | 1 |
presumptive neural retina | 3.31e-09 | 1 |