FFCP PHASE1:Hg19::chr11:90181744..90181756,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:90181744..90181756,+ | |||
|coexpression_cluster_id=C101 | |coexpression_cluster_id=C101 | ||
|description=CAGE_peak_at_chr11:90181744..90181756,+ | |description=CAGE_peak_at_chr11:90181744..90181756,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!9.51e-64!4;CL:0002253!3.58e-57!2;CL:0002251!7.43e-13!21;CL:0002076!4.89e-11!43;CL:0002231!8.99e-11!3;CL:0000223!3.63e-08!59 | |ontology_enrichment_celltype=CL:0002563!9.51e-64!4;CL:0002253!3.58e-57!2;CL:0002251!7.43e-13!21;CL:0002076!4.89e-11!43;CL:0002231!8.99e-11!3;CL:0000223!3.63e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.61e-34;2!CL:0002563;7.35e-18;4 | |ontology_enrichment_celltype_v019=CL:0002253;3.61e-34;2!CL:0002563;7.35e-18;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.61e-34,2;CL:0002563,7.35e-18,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050619!1.33e-29!1;DOID:1357!1.33e-29!1;DOID:3119!5.73e-19!14;DOID:5409!2.61e-08!4;DOID:0050615!4.91e-08!16 | |ontology_enrichment_disease=DOID:0050619!1.33e-29!1;DOID:1357!1.33e-29!1;DOID:3119!5.73e-19!14;DOID:5409!2.61e-08!4;DOID:0050615!4.91e-08!16 | ||
|ontology_enrichment_disease_v019=DOID:0050619;4.66e-66;1!DOID:1357;4.66e-66;1!DOID:3119;5.89e-20;14 | |ontology_enrichment_disease_v019=DOID:0050619;4.66e-66;1!DOID:1357;4.66e-66;1!DOID:3119;5.89e-20;14 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.66e-66,1;DOID:1357,4.66e-66,1;DOID:3119,5.89e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0001242!9.51e-64!4;UBERON:0001262!9.51e-64!4;UBERON:0004786!9.51e-64!4;UBERON:0004808!9.51e-64!4;UBERON:0001277!9.51e-64!4;UBERON:0003350!3.24e-51!5;UBERON:0001764!1.33e-29!1;UBERON:0001825!1.33e-29!1;UBERON:0001052!3.16e-29!4;UBERON:0000485!6.82e-29!9;UBERON:0004907!1.28e-23!5;UBERON:0000344!6.79e-22!12;UBERON:0000060!6.79e-22!12;UBERON:0001046!3.79e-14!19;UBERON:0001155!1.31e-13!9;UBERON:0000059!2.55e-11!11;UBERON:0000160!8.05e-10!27;UBERON:0005911!6.11e-09!82;UBERON:0003929!6.97e-09!54;UBERON:0005409!8.74e-08!35 | |ontology_enrichment_uberon=UBERON:0001242!9.51e-64!4;UBERON:0001262!9.51e-64!4;UBERON:0004786!9.51e-64!4;UBERON:0004808!9.51e-64!4;UBERON:0001277!9.51e-64!4;UBERON:0003350!3.24e-51!5;UBERON:0001764!1.33e-29!1;UBERON:0001825!1.33e-29!1;UBERON:0001052!3.16e-29!4;UBERON:0000485!6.82e-29!9;UBERON:0004907!1.28e-23!5;UBERON:0000344!6.79e-22!12;UBERON:0000060!6.79e-22!12;UBERON:0001046!3.79e-14!19;UBERON:0001155!1.31e-13!9;UBERON:0000059!2.55e-11!11;UBERON:0000160!8.05e-10!27;UBERON:0005911!6.11e-09!82;UBERON:0003929!6.97e-09!54;UBERON:0005409!8.74e-08!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;4.66e-66;1!UBERON:0001825;4.66e-66;1!UBERON:0001052;7.35e-18;4!UBERON:0001242;7.35e-18;4!UBERON:0001262;7.35e-18;4!UBERON:0004786;7.35e-18;4!UBERON:0004808;7.35e-18;4!UBERON:0001277;7.35e-18;4!UBERON:0004907;1.40e-14;5!UBERON:0000485;8.16e-11;7!UBERON:0003929;8.16e-11;7!UBERON:0003350;1.24e-09;8!UBERON:0001155;1.04e-08;9!UBERON:0000059;2.32e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001764;4.66e-66;1!UBERON:0001825;4.66e-66;1!UBERON:0001052;7.35e-18;4!UBERON:0001242;7.35e-18;4!UBERON:0001262;7.35e-18;4!UBERON:0004786;7.35e-18;4!UBERON:0004808;7.35e-18;4!UBERON:0001277;7.35e-18;4!UBERON:0004907;1.40e-14;5!UBERON:0000485;8.16e-11;7!UBERON:0003929;8.16e-11;7!UBERON:0003350;1.24e-09;8!UBERON:0001155;1.04e-08;9!UBERON:0000059;2.32e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,4.66e-66,1;UBERON:0001825,4.66e-66,1;UBERON:0001052,7.35e-18,4;UBERON:0001242,7.35e-18,4;UBERON:0001262,7.35e-18,4;UBERON:0004786,7.35e-18,4;UBERON:0004808,7.35e-18,4;UBERON:0001277,7.35e-18,4;UBERON:0004907,1.40e-14,5;UBERON:0003350,1.24e-09,8;UBERON:0001155,1.04e-08,9;UBERON:0000485,1.04e-08,9;UBERON:0000059,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,9.52110014865201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65394746500843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35593255677747,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,9.52110014865201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65394746500843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35593255677747,0,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:90181744..90181756,+ | |short_description=p@chr11:90181744..90181756,+ | ||
}} | }} |
Latest revision as of 03:27, 24 July 2015
Short description: | p@chr11:90181744..90181756, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:90181744..90181756, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.61e-34 | 2 |
intestinal epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 4.66e-66 | 1 |
paranasal sinus | 4.66e-66 | 1 |
rectum | 7.35e-18 | 4 |
intestinal mucosa | 7.35e-18 | 4 |
wall of intestine | 7.35e-18 | 4 |
gastrointestinal system mucosa | 7.35e-18 | 4 |
gastrointestinal system epithelium | 7.35e-18 | 4 |
intestinal epithelium | 7.35e-18 | 4 |
lower digestive tract | 1.40e-14 | 5 |
epithelium of mucosa | 1.24e-09 | 8 |
colon | 1.04e-08 | 9 |
simple columnar epithelium | 1.04e-08 | 9 |
large intestine | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.66e-66 | 1 |
maxillary sinus cancer | 4.66e-66 | 1 |
gastrointestinal system cancer | 5.89e-20 | 14 |