FFCP PHASE1:Hg19::chr12:111099170..111099184,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111099170..111099184,- | |||
|description=CAGE_peak_at_chr12:111099170..111099184,- | |description=CAGE_peak_at_chr12:111099170..111099184,- | ||
|id=chr12:111099170..111099184,- | |id=chr12:111099170..111099184,- | ||
|ontology_enrichment_celltype=CL:0000738!3.66e-30!140;CL:0000037!2.09e-28!172;CL:0000566!2.09e-28!172;CL:0000988!4.15e-27!182;CL:0002032!2.60e-26!165;CL:0000837!2.60e-26!165;CL:0002031!2.96e-26!124;CL:0002087!4.09e-26!119;CL:0000945!4.96e-19!24;CL:0000826!4.96e-19!24;CL:0000557!6.91e-18!71;CL:0002009!3.65e-17!65;CL:0002057!6.33e-17!42;CL:0000763!2.48e-16!112;CL:0000049!2.48e-16!112;CL:0000839!5.32e-16!70;CL:0000766!7.27e-16!76;CL:0002194!1.13e-15!63;CL:0000576!1.13e-15!63;CL:0000040!1.13e-15!63;CL:0000559!1.13e-15!63;CL:0000860!3.57e-15!45;CL:0000236!1.72e-13!14;CL:0000542!1.37e-09!53;CL:0000051!1.37e-09!53;CL:0000838!4.40e-09!52;CL:0000451!2.02e-07!10 | |ontology_enrichment_celltype=CL:0000738!3.66e-30!140;CL:0000037!2.09e-28!172;CL:0000566!2.09e-28!172;CL:0000988!4.15e-27!182;CL:0002032!2.60e-26!165;CL:0000837!2.60e-26!165;CL:0002031!2.96e-26!124;CL:0002087!4.09e-26!119;CL:0000945!4.96e-19!24;CL:0000826!4.96e-19!24;CL:0000557!6.91e-18!71;CL:0002009!3.65e-17!65;CL:0002057!6.33e-17!42;CL:0000763!2.48e-16!112;CL:0000049!2.48e-16!112;CL:0000839!5.32e-16!70;CL:0000766!7.27e-16!76;CL:0002194!1.13e-15!63;CL:0000576!1.13e-15!63;CL:0000040!1.13e-15!63;CL:0000559!1.13e-15!63;CL:0000860!3.57e-15!45;CL:0000236!1.72e-13!14;CL:0000542!1.37e-09!53;CL:0000051!1.37e-09!53;CL:0000838!4.40e-09!52;CL:0000451!2.02e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.92e-53;13!CL:0000945;9.34e-35;24!CL:0000542;3.21e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.85e-49,14;CL:0000945,6.20e-35,24;CL:0000826,6.20e-35,24;CL:0000838,2.53e-15,52;CL:0000542,5.25e-15,53;CL:0000051,5.25e-15,53;CL:0002087,1.70e-10,115;CL:0000738,4.24e-10,136;CL:0002031,2.12e-08,120;CL:0000037,9.95e-08,168;CL:0000988,3.24e-07,177;CL:0002032,6.32e-07,161;CL:0000837,6.32e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;3.21e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;6.05e-10;1!DOID:0050177;6.05e-10;1!DOID:0050427;6.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.33e-10,1;DOID:0050177,6.33e-10,1;DOID:0050427,6.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.78e-16!102;UBERON:0003061!4.78e-16!102;UBERON:0002193!7.68e-15!112;UBERON:0002371!1.85e-14!80;UBERON:0001474!1.32e-12!86;UBERON:0002405!1.23e-10!115;UBERON:0004765!3.11e-10!101;UBERON:0001434!3.11e-10!101;UBERON:0007023!1.57e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!4.78e-16!102;UBERON:0003061!4.78e-16!102;UBERON:0002193!7.68e-15!112;UBERON:0002371!1.85e-14!80;UBERON:0001474!1.32e-12!86;UBERON:0002405!1.23e-10!115;UBERON:0004765!3.11e-10!101;UBERON:0001434!3.11e-10!101;UBERON:0007023!1.57e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;6.05e-10;1!UBERON:0002134;6.05e-10;1!UBERON:0009661;6.05e-10;1!UBERON:0005208;6.05e-10;1!UBERON:0002950;6.05e-10;1!UBERON:0004145;6.05e-10;1!UBERON:0005946;6.05e-10;1!UBERON:0001891;6.05e-10;1!UBERON:0005965;6.05e-10;1!UBERON:0002078;6.05e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,8.24e-10,1;UBERON:0005208,8.24e-10,1;UBERON:0005946,8.24e-10,1;UBERON:0005965,8.24e-10,1;UBERON:0002078,8.24e-10,1;UBERON:0002038,1.17e-09,1;UBERON:0009661,1.17e-09,1;UBERON:0002950,1.17e-09,1;UBERON:0001891,1.17e-09,1;UBERON:0009616,1.17e-09,1;UBERON:0010286,1.17e-09,1 | |||
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|short_description=p@chr12:111099170..111099184,- | |short_description=p@chr12:111099170..111099184,- | ||
}} | }} |
Latest revision as of 04:56, 24 July 2015
Short description: | p@chr12:111099170..111099184, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111099170..111099184, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.85e-49 | 14 |
lymphocyte of B lineage | 6.20e-35 | 24 |
pro-B cell | 6.20e-35 | 24 |
lymphoid lineage restricted progenitor cell | 2.53e-15 | 52 |
lymphocyte | 5.25e-15 | 53 |
common lymphoid progenitor | 5.25e-15 | 53 |
nongranular leukocyte | 1.70e-10 | 115 |
leukocyte | 4.24e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 2.12e-08 | 120 |
hematopoietic stem cell | 9.95e-08 | 168 |
hematopoietic cell | 3.24e-07 | 177 |
hematopoietic oligopotent progenitor cell | 6.32e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.32e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 8.24e-10 | 1 |
right atrium valve | 8.24e-10 | 1 |
outflow tract of atrium | 8.24e-10 | 1 |
outflow part of right atrium | 8.24e-10 | 1 |
right cardiac atrium | 8.24e-10 | 1 |
substantia nigra | 1.17e-09 | 1 |
midbrain nucleus | 1.17e-09 | 1 |
regional part of midbrain | 1.17e-09 | 1 |
midbrain | 1.17e-09 | 1 |
presumptive midbrain | 1.17e-09 | 1 |
midbrain neural tube | 1.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.33e-10 | 1 |
monogenic disease | 6.33e-10 | 1 |
xeroderma pigmentosum | 6.33e-10 | 1 |