FFCP PHASE1:Hg19::chr12:114299021..114299036,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114299021..114299036,+ | |||
|description=CAGE_peak_at_chr12:114299021..114299036,+ | |description=CAGE_peak_at_chr12:114299021..114299036,+ | ||
|id=chr12:114299021..114299036,+ | |id=chr12:114299021..114299036,+ | ||
|ontology_enrichment_celltype=CL:0000548!6.16e-08!679;CL:0000004!6.16e-08!679;CL:0000255!6.16e-08!679;CL:0000012!1.01e-07!682;CL:0000057!1.66e-07!75;CL:0000055!3.66e-07!180 | |ontology_enrichment_celltype=CL:0000548!6.16e-08!679;CL:0000004!6.16e-08!679;CL:0000255!6.16e-08!679;CL:0000012!1.01e-07!682;CL:0000057!1.66e-07!75;CL:0000055!3.66e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000159;2.25e-16;2!CL:0000319;4.02e-09;1!CL:0000313;5.70e-09;1!CL:0002550;1.27e-08;1!CL:0002379;1.27e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,2.53e-16,2;CL:0000319,3.87e-09,1;CL:0000313,6.65e-09,1;CL:0002379,1.05e-08,1;CL:0002550,1.65e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;4.02e-09;1!DOID:2152;5.70e-09;1!DOID:3620;1.27e-08;1!DOID:3565;1.27e-08;1!DOID:225;1.27e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.87e-09,1;DOID:2152,6.65e-09,1;DOID:225,8.36e-09,1;DOID:3620,1.05e-08,1;DOID:3565,1.05e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.70e-09;1!UBERON:0002331;1.96e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.65e-09,1;UBERON:0002331,1.90e-07,10;UBERON:0000358,1.90e-07,10;UBERON:0000307,1.90e-07,10;UBERON:0000091,1.90e-07,10;UBERON:0000087,1.90e-07,10;UBERON:0007010,1.90e-07,10;UBERON:0007806,1.90e-07,10;UBERON:0008780,1.90e-07,10;UBERON:0005728,1.90e-07,10 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0.641858054152187,1.27867425159808,0,0.398927315243264,0,0.580418477257168,1.70215567407342,0,0.251248665256743,1.0429658368404,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,1.17160715916898,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,1.43723628363248,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.506328996723799,0.389748020644795,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.870036464629098,0.154048617114644,0,0.275673144969061,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0.699869440489966,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0.94007937463814,0,0,1.605880751037,1.81619736471943,1.70338495076131,0,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0.824019371133798,0,0.19924798825107,0,0,0.920418142519393,0,0.311039587661807,0.0898683511473268,0.895105873378046,5.11572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39664619741778,0,0,0.113942055847001,0,0.897576444097721,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,3.55825354416746,2.47127877893006,2.19286093961456,0,0,0,0,0,0,0,0,0,0,12.1761969725739,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0.292357268344742,0,0,0,0,3.42604811616877,0.397429223405979,0,0,0.801588202515337,0,0,0,0,0.343189995723929,0,0.745515213392595,0.942776138467182,0,0,0.407992870545287,1.15580235960608,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,1.97216073266129,0.191915197319445,0,0,0,0,0,0,0,0,0.511164065356265,0.113312091520126,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,1.6468607378872,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,1.15571898244382,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0.506827321959218,0.256241518587947,0,0,0,0,0,0,0.982829546539238,3.44082072255207,0,0,1.70706767510625,0,0.567515953566836,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,1.37406805901436,0,0.733714394086716,0.808679663052368,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,2.01339777236026,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.960546112899439,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0.641858054152187,1.27867425159808,0,0.398927315243264,0,0.580418477257168,1.70215567407342,0,0.251248665256743,1.0429658368404,0,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0,1.17160715916898,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,1.43723628363248,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.506328996723799,0.389748020644795,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.870036464629098,0.154048617114644,0,0.275673144969061,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0.699869440489966,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0.94007937463814,0,0,1.605880751037,1.81619736471943,1.70338495076131,0,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0.824019371133798,0,0.19924798825107,0,0,0.920418142519393,0,0.311039587661807,0.0898683511473268,0.895105873378046,5.11572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39664619741778,0,0,0.113942055847001,0,0.897576444097721,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,3.55825354416746,2.47127877893006,2.19286093961456,0,0,0,0,0,0,0,0,0,0,12.1761969725739,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0.292357268344742,0,0,0,0,3.42604811616877,0.397429223405979,0,0,0.801588202515337,0,0,0,0,0.343189995723929,0,0.745515213392595,0.942776138467182,0,0,0.407992870545287,1.15580235960608,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0.105600336519406,1.97216073266129,0.191915197319445,0,0,0,0,0,0,0,0,0.511164065356265,0.113312091520126,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,1.6468607378872,0,0,0.447764408660622,0.934853239388898,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,1.15571898244382,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0.506827321959218,0.256241518587947,0,0,0,0,0,0,0.982829546539238,3.44082072255207,0,0,1.70706767510625,0,0.567515953566836,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,1.37406805901436,0,0.733714394086716,0.808679663052368,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,2.01339777236026,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.960546112899439,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:114299021..114299036,+ | |short_description=p@chr12:114299021..114299036,+ | ||
}} | }} |
Latest revision as of 05:16, 24 July 2015
Short description: | p@chr12:114299021..114299036, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:114299021..114299036, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 2.53e-16 | 2 |
mucus secreting cell | 3.87e-09 | 1 |
serous secreting cell | 6.65e-09 | 1 |
meningothelial cell | 1.05e-08 | 1 |
fibroblast of the conjuctiva | 1.65e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.65e-09 | 1 |
umbilical cord | 1.90e-07 | 10 |
blastocyst | 1.90e-07 | 10 |
blastula | 1.90e-07 | 10 |
bilaminar disc | 1.90e-07 | 10 |
inner cell mass | 1.90e-07 | 10 |
cleaving embryo | 1.90e-07 | 10 |
connecting stalk | 1.90e-07 | 10 |
inner cell mass derived epiblast | 1.90e-07 | 10 |
extraembryonic mesoderm | 1.90e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.87e-09 | 1 |
ovary epithelial cancer | 6.65e-09 | 1 |
syndrome | 8.36e-09 | 1 |
central nervous system cancer | 1.05e-08 | 1 |
meningioma | 1.05e-08 | 1 |