FFCP PHASE1:Hg19::chr12:114400234..114400245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114400234..114400245,- | |||
|description=CAGE_peak_at_chr12:114400234..114400245,- | |description=CAGE_peak_at_chr12:114400234..114400245,- | ||
|id=chr12:114400234..114400245,- | |id=chr12:114400234..114400245,- | ||
|ontology_enrichment_celltype=CL:0000080!7.40e-17!6;CL:0000738!3.10e-13!140;CL:0000988!4.12e-13!182;CL:0000453!5.78e-12!5;CL:0002087!3.62e-11!119;CL:0000037!5.04e-10!172;CL:0000566!5.04e-10!172;CL:0002032!2.10e-09!165;CL:0000837!2.10e-09!165;CL:0002031!3.16e-09!124;CL:0000945!8.23e-09!24;CL:0000826!8.23e-09!24;CL:0000946!2.07e-07!1;CL:0000786!2.07e-07!1;CL:0000980!2.07e-07!1;CL:0000990!7.69e-07!8 | |ontology_enrichment_celltype=CL:0000080!7.40e-17!6;CL:0000738!3.10e-13!140;CL:0000988!4.12e-13!182;CL:0000453!5.78e-12!5;CL:0002087!3.62e-11!119;CL:0000037!5.04e-10!172;CL:0000566!5.04e-10!172;CL:0002032!2.10e-09!165;CL:0000837!2.10e-09!165;CL:0002031!3.16e-09!124;CL:0000945!8.23e-09!24;CL:0000826!8.23e-09!24;CL:0000946!2.07e-07!1;CL:0000786!2.07e-07!1;CL:0000980!2.07e-07!1;CL:0000990!7.69e-07!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.42e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!8.00e-08!1;DOID:0060061!8.00e-08!1;DOID:8691!8.00e-08!1;DOID:630!2.35e-07!1;DOID:0050177!2.35e-07!1;DOID:0050427!2.35e-07!1 | |ontology_enrichment_disease=DOID:0060060!8.00e-08!1;DOID:0060061!8.00e-08!1;DOID:8691!8.00e-08!1;DOID:630!2.35e-07!1;DOID:0050177!2.35e-07!1;DOID:0050427!2.35e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.54e-21;1!DOID:0060061;2.54e-21;1!DOID:8691;2.54e-21;1!DOID:0060058;5.25e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.82e-21,1;DOID:0060061,2.82e-21,1;DOID:8691,2.82e-21,1;DOID:0060058,5.36e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.53e-09!112;UBERON:0002390!9.72e-09!102;UBERON:0003061!9.72e-09!102;UBERON:0002372!4.61e-07!1;UBERON:0001961!4.61e-07!1;UBERON:0001744!4.61e-07!1;UBERON:0001735!4.61e-07!1;UBERON:0000178!8.34e-07!15;UBERON:0000179!8.34e-07!15;UBERON:0000463!8.34e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!5.53e-09!112;UBERON:0002390!9.72e-09!102;UBERON:0003061!9.72e-09!102;UBERON:0002372!4.61e-07!1;UBERON:0001961!4.61e-07!1;UBERON:0001744!4.61e-07!1;UBERON:0001735!4.61e-07!1;UBERON:0000178!8.34e-07!15;UBERON:0000179!8.34e-07!15;UBERON:0000463!8.34e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.39e-18;10!UBERON:0000178;1.82e-12;15!UBERON:0000179;1.82e-12;15!UBERON:0000463;1.82e-12;15!UBERON:0002390;4.65e-10;32!UBERON:0002106;4.84e-08;3!UBERON:0000478;5.04e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.13e-18,10;UBERON:0000358,3.13e-18,10;UBERON:0000307,3.13e-18,10;UBERON:0000091,3.13e-18,10;UBERON:0000087,3.13e-18,10;UBERON:0007010,3.13e-18,10;UBERON:0007806,3.13e-18,10;UBERON:0008780,3.13e-18,10;UBERON:0005728,3.13e-18,10;UBERON:0000178,2.17e-12,15;UBERON:0000179,2.17e-12,15;UBERON:0000463,2.17e-12,15;UBERON:0002106,4.84e-08,3;UBERON:0004854,4.84e-08,3;UBERON:0009034,4.84e-08,3;UBERON:0002095,4.84e-08,3;UBERON:0004782,4.84e-08,3;UBERON:0003281,4.84e-08,3;UBERON:0009664,4.84e-08,3;UBERON:0002296,4.84e-08,3;UBERON:0005602,4.84e-08,3;UBERON:0001179,4.84e-08,3;UBERON:0006293,4.84e-08,3;UBERON:0000478,5.63e-08,24 | |||
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|short_description=p@chr12:114400234..114400245,- | |short_description=p@chr12:114400234..114400245,- | ||
}} | }} |
Latest revision as of 05:16, 24 July 2015
Short description: | p@chr12:114400234..114400245, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:114400234..114400245, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.42e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.13e-18 | 10 |
blastocyst | 3.13e-18 | 10 |
blastula | 3.13e-18 | 10 |
bilaminar disc | 3.13e-18 | 10 |
inner cell mass | 3.13e-18 | 10 |
cleaving embryo | 3.13e-18 | 10 |
connecting stalk | 3.13e-18 | 10 |
inner cell mass derived epiblast | 3.13e-18 | 10 |
extraembryonic mesoderm | 3.13e-18 | 10 |
blood | 2.17e-12 | 15 |
haemolymphatic fluid | 2.17e-12 | 15 |
organism substance | 2.17e-12 | 15 |
spleen | 4.84e-08 | 3 |
gastrointestinal system mesentery | 4.84e-08 | 3 |
stomach region | 4.84e-08 | 3 |
mesentery | 4.84e-08 | 3 |
gastrointestinal system serosa | 4.84e-08 | 3 |
mesentery of stomach | 4.84e-08 | 3 |
gut mesentery | 4.84e-08 | 3 |
dorsal mesentery | 4.84e-08 | 3 |
dorsal mesogastrium | 4.84e-08 | 3 |
peritoneal cavity | 4.84e-08 | 3 |
spleen primordium | 4.84e-08 | 3 |
extraembryonic structure | 5.63e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.82e-21 | 1 |
cutaneous T cell lymphoma | 2.82e-21 | 1 |
mycosis fungoides | 2.82e-21 | 1 |
lymphoma | 5.36e-09 | 10 |