FFCP PHASE1:Hg19::chr12:127690461..127690477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:127690461..127690477,- | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_at_chr12:127690461..127690477,- | |description=CAGE_peak_at_chr12:127690461..127690477,- | ||
|id=chr12:127690461..127690477,- | |id=chr12:127690461..127690477,- | ||
|ontology_enrichment_celltype=CL:1000507!1.54e-09!12;CL:1000494!1.54e-09!12;CL:1000497!1.50e-08!18;CL:0002518!1.50e-08!18 | |ontology_enrichment_celltype=CL:1000507!1.54e-09!12;CL:1000494!1.54e-09!12;CL:1000497!1.50e-08!18;CL:0002518!1.50e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.76e-25;10!CL:1000494;7.76e-25;10!CL:1000497;9.07e-21;17!CL:0002518;9.07e-21;17!CL:1000449;6.35e-16;15!CL:0002681;5.66e-09;12!CL:0002584;5.66e-09;12!CL:0000650;1.30e-07;2!CL:1000500;1.30e-07;2!CL:1000618;1.30e-07;2!CL:1001318;1.30e-07;2!CL:0002173;1.30e-07;2!CL:0000669;1.39e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,7.68e-25,10;CL:1000494,7.68e-25,10;CL:1000497,9.45e-21,17;CL:0002518,9.45e-21,17;CL:1000449,6.31e-16,15;CL:0002681,5.67e-09,12;CL:0002584,5.67e-09,12;CL:0000650,1.32e-07,2;CL:1000500,1.32e-07,2;CL:1000618,1.32e-07,2;CL:1001318,1.32e-07,2;CL:0002173,1.32e-07,2;CL:0000669,1.73e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.04e-11!14;DOID:120!4.20e-10!27;DOID:193!4.54e-09!29 | |ontology_enrichment_disease=DOID:2394!7.04e-11!14;DOID:120!4.20e-10!27;DOID:193!4.54e-09!29 | ||
|ontology_enrichment_disease_v019=DOID:120;4.67e-08;27!DOID:193;2.22e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,4.67e-08,27;DOID:193,2.22e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.54e-09!12;UBERON:0001231!1.54e-09!12;UBERON:0004810!1.54e-09!12;UBERON:0002113!2.19e-07!27;UBERON:0003918!2.19e-07!27;UBERON:0005095!2.19e-07!27;UBERON:0007687!2.19e-07!27;UBERON:0000489!2.95e-07!32;UBERON:0003134!9.42e-07!37;UBERON:0000474!9.42e-07!37 | |ontology_enrichment_uberon=UBERON:0009773!1.54e-09!12;UBERON:0001231!1.54e-09!12;UBERON:0004810!1.54e-09!12;UBERON:0002113!2.19e-07!27;UBERON:0003918!2.19e-07!27;UBERON:0005095!2.19e-07!27;UBERON:0007687!2.19e-07!27;UBERON:0000489!2.95e-07!32;UBERON:0003134!9.42e-07!37;UBERON:0000474!9.42e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;7.76e-25;10!UBERON:0009773;7.76e-25;10!UBERON:0001231;7.76e-25;10!UBERON:0004810;7.76e-25;10!UBERON:0002113;1.48e-16;24!UBERON:0011143;1.48e-16;24!UBERON:0006555;6.35e-16;15!UBERON:0004819;6.35e-16;15!UBERON:0001285;6.35e-16;15!UBERON:0007684;6.35e-16;15!UBERON:0000489;3.31e-13;29!UBERON:0006554;1.13e-12;30!UBERON:0001008;1.13e-12;30!UBERON:0000353;3.84e-12;15!UBERON:0001013;2.19e-09;14!UBERON:0001225;5.66e-09;12!UBERON:0008987;5.66e-09;12!UBERON:0003567;1.30e-07;2!UBERON:0003838;1.30e-07;2!UBERON:0003586;1.30e-07;2!UBERON:0005169;1.30e-07;2!UBERON:0002321;1.30e-07;2!UBERON:0005215;1.30e-07;2!UBERON:0002303;1.30e-07;2!UBERON:0002319;1.30e-07;2!UBERON:0001851;5.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,7.68e-25,10;UBERON:0004211,6.31e-16,15;UBERON:0009773,6.31e-16,15;UBERON:0001231,6.31e-16,15;UBERON:0001285,6.31e-16,15;UBERON:0007684,6.31e-16,15;UBERON:0004208,6.31e-16,15;UBERON:0002113,4.89e-15,26;UBERON:0003918,4.89e-15,26;UBERON:0011143,4.89e-15,26;UBERON:0005095,4.89e-15,26;UBERON:0007687,4.89e-15,26;UBERON:0006555,8.19e-15,16;UBERON:0004819,8.19e-15,16;UBERON:0000489,3.74e-12,31;UBERON:0000353,3.94e-12,15;UBERON:0005172,2.14e-09,54;UBERON:0005173,2.14e-09,54;UBERON:0001013,2.36e-09,14;UBERON:0001225,5.67e-09,12;UBERON:0008987,5.67e-09,12;UBERON:0006554,2.01e-08,47;UBERON:0001008,3.46e-08,48;UBERON:0002417,4.13e-08,60;UBERON:0000916,4.13e-08,60;UBERON:0003567,1.32e-07,2;UBERON:0003838,1.32e-07,2;UBERON:0003586,1.32e-07,2;UBERON:0005169,1.32e-07,2;UBERON:0002321,1.32e-07,2;UBERON:0005215,1.32e-07,2;UBERON:0002303,1.32e-07,2;UBERON:0002319,1.32e-07,2;UBERON:0001851,5.02e-07,15;UBERON:0003104,6.34e-07,160;UBERON:0009142,6.34e-07,160;UBERON:0003103,7.27e-07,68 | |||
|phase1_expression=0,0,0,0,0,4.36169262050184,0,5.05375898741465,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,1.35426486594342,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.886917589850256,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0,0.151357427644931,0,0.70296429550139,0,0,1.34503812496621,0,0,0,0,0.368502951935304,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,9.60779737671743,0.109750285408626,0,0,0,0,0,1.44331342025273,0.811512834825538,0.587043471179108,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0.387815147273333,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,3.32997005335432,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,2.98391526069709,0,0,0,0.702848489956279,0.601892199455438,6.82222512167955,3.10419213877515,0,0.184369168541703,1.82455590382974,0,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,1.9531789784444,1.72467027628999,0,3.60252173225874,0,0,0,0,0.182091168006717,0.524497659837696,11.2799903226853,3.85076685522074,14.9026456143602,17.5367069583913,21.1103257785751,0,0,0,0,8.12839312631558,18.5625216326296,3.3133915495855,0,8.2833659247206,0,0,0,0,0.976135183992909,0.618246069886334,0,0,0,0,0,10.1504254206728,0,0,0,0.107420244868274,0.145016693914229,0,3.82837753280971,0,0,0,0,0.464845549297286,0,0,0,3.72614221221915,0.869932992075073,0,0,0.372158369359667,2.53103539774981,0,0,0,0,0,0,0,0,2.42618977887979,0,0.842516912477962,0,0.487426979262569,0,0,0,5.65040583101214,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,1.41904425628239,0,0.987884678879706,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,2.13648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,9.90647474703862,0,0,0,0,0,5.21570280760989,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34616986268648,0.0769502585037971,14.5845831484162,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,35.4476748407085,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,4.57626420943358,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,1.64180283175561,0.467426619694449,29.4047106596385,1.13641803165053,6.0376296420618,16.0166019887376,9.38244280427387,0.151230923763239,0.621748802331122,0.443565449968902,0.159296767163702,15.2933058135626,10.5578810675856,0.414706207840855,0.265841714557995,32.3481938323275,0.150257608997218,0,0.406870733204662,0.181848659202559,4.83347506691198,11.1368102370838,0.398095888698616,0,1.03018711554838,1.6837474438296,3.78554694685953,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,97.1155355448318,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20530209887809,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90290428715611,0,0.171488009437418,0,0,0,0.333694205676207,0.078493092850514,0,0,0,22.8883246691739,3.34426181520935,0,0,0,0,0,0,0,0,0,3.54996002191696,2.72682895229305,0,0,11.4776362695798,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0.213233981900981,0,0,0.124149428591716,6.72791175483681,0,0,0.435433495793923,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,4.36169262050184,0,5.05375898741465,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,1.35426486594342,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.886917589850256,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0,0,0.151357427644931,0,0.70296429550139,0,0,1.34503812496621,0,0,0,0,0.368502951935304,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,9.60779737671743,0.109750285408626,0,0,0,0,0,1.44331342025273,0.811512834825538,0.587043471179108,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0.387815147273333,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,3.32997005335432,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,2.98391526069709,0,0,0,0.702848489956279,0.601892199455438,6.82222512167955,3.10419213877515,0,0.184369168541703,1.82455590382974,0,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,1.9531789784444,1.72467027628999,0,3.60252173225874,0,0,0,0,0.182091168006717,0.524497659837696,11.2799903226853,3.85076685522074,14.9026456143602,17.5367069583913,21.1103257785751,0,0,0,0,8.12839312631558,18.5625216326296,3.3133915495855,0,8.2833659247206,0,0,0,0,0.976135183992909,0.618246069886334,0,0,0,0,0,10.1504254206728,0,0,0,0.107420244868274,0.145016693914229,0,3.82837753280971,0,0,0,0,0.464845549297286,0,0,0,3.72614221221915,0.869932992075073,0,0,0.372158369359667,2.53103539774981,0,0,0,0,0,0,0,0,2.42618977887979,0,0.842516912477962,0,0.487426979262569,0,0,0,5.65040583101214,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,1.41904425628239,0,0.987884678879706,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,2.13648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,9.90647474703862,0,0,0,0,0,5.21570280760989,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34616986268648,0.0769502585037971,14.5845831484162,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,35.4476748407085,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,4.57626420943358,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,1.64180283175561,0.467426619694449,29.4047106596385,1.13641803165053,6.0376296420618,16.0166019887376,9.38244280427387,0.151230923763239,0.621748802331122,0.443565449968902,0.159296767163702,15.2933058135626,10.5578810675856,0.414706207840855,0.265841714557995,32.3481938323275,0.150257608997218,0,0.406870733204662,0.181848659202559,4.83347506691198,11.1368102370838,0.398095888698616,0,1.03018711554838,1.6837474438296,3.78554694685953,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,97.1155355448318,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20530209887809,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90290428715611,0,0.171488009437418,0,0,0,0.333694205676207,0.078493092850514,0,0,0,22.8883246691739,3.34426181520935,0,0,0,0,0,0,0,0,0,3.54996002191696,2.72682895229305,0,0,11.4776362695798,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0.530450887527676,0,0,0,0.213233981900981,0,0,0.124149428591716,6.72791175483681,0,0,0.435433495793923,0.684466602170562,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:127690461..127690477,- | |short_description=p@chr12:127690461..127690477,- | ||
}} | }} |
Latest revision as of 06:36, 24 July 2015
Short description: | p@chr12:127690461..127690477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127690461..127690477, - |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 7.68e-25 | 10 |
nephron tubule epithelial cell | 7.68e-25 | 10 |
kidney cell | 9.45e-21 | 17 |
kidney epithelial cell | 9.45e-21 | 17 |
epithelial cell of nephron | 6.31e-16 | 15 |
kidney cortical cell | 5.67e-09 | 12 |
renal cortical epithelial cell | 5.67e-09 | 12 |
mesangial cell | 1.32e-07 | 2 |
kidney interstitial cell | 1.32e-07 | 2 |
juxtaglomerular complex cell | 1.32e-07 | 2 |
renal interstitial pericyte | 1.32e-07 | 2 |
extraglomerular mesangial cell | 1.32e-07 | 2 |
pericyte cell | 1.73e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 4.67e-08 | 27 |
reproductive organ cancer | 2.22e-07 | 29 |