FFCP PHASE1:Hg19::chr12:127762515..127762539,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:127762515..127762539,- | |||
|coexpression_cluster_id=C684 | |||
|description=CAGE_peak_at_chr12:127762515..127762539,- | |||
|id=chr12:127762515..127762539,- | |||
|ontology_enrichment_celltype=CL:0002057!7.87e-12!42;CL:0000860!7.96e-11!45;CL:0000134!4.18e-08!358;CL:0000766!5.37e-08!76;CL:0002194!6.64e-08!63;CL:0000576!6.64e-08!63;CL:0000040!6.64e-08!63;CL:0000559!6.64e-08!63;CL:0000839!7.74e-08!70;CL:0002320!9.41e-08!365;CL:0000557!1.11e-07!71;CL:0002009!1.45e-07!65;CL:0000048!4.01e-07!430;CL:0000723!7.12e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.33e-13;1!CL:0000786;1.33e-13;1!CL:0002149;2.55e-09;6!CL:0002255;2.55e-09;6!CL:0000054;9.86e-08;2!CL:0000137;9.86e-08;2!CL:0000092;9.86e-08;2!CL:0002262;1.93e-07;2!CL:1000398;1.93e-07;2!CL:0002593;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.42e-13,1;CL:0000786,1.42e-13,1;CL:0000980,1.42e-13,1;CL:0002149,2.45e-09,6;CL:0002255,2.45e-09,6;CL:0000054,9.87e-08,2;CL:0000137,9.87e-08,2;CL:0000092,9.87e-08,2;CL:0002262,1.87e-07,2;CL:1000398,1.87e-07,2;CL:0000785,1.99e-07,2;CL:0000955,1.99e-07,2;CL:0000818,1.99e-07,2;CL:0000954,1.99e-07,2;CL:0000816,1.99e-07,2;CL:0002593,2.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.33e-11;5!CL:0000954;1.93e-07;2 | |||
|ontology_enrichment_disease=DOID:120!4.27e-18!27;DOID:2394!1.54e-17!14;DOID:193!1.25e-16!29 | |||
|ontology_enrichment_disease_v019=DOID:120;5.58e-22;27!DOID:193;1.97e-20;29!DOID:2394;1.62e-14;14!DOID:0060085;3.50e-14;1!DOID:3165;3.50e-14;1!DOID:0060121;3.50e-14;1!DOID:2438;3.50e-14;1!DOID:4418;3.50e-14;1!DOID:3001;2.55e-09;6!DOID:200;9.86e-08;2!DOID:4305;9.86e-08;2!DOID:4468;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:120,5.86e-22,27;DOID:193,2.06e-20,29;DOID:2394,1.94e-14,14;DOID:0060085,3.50e-14,1;DOID:3165,3.50e-14,1;DOID:0060121,3.50e-14,1;DOID:2438,3.50e-14,1;DOID:4418,3.50e-14,1;DOID:3001,2.45e-09,6;DOID:200,9.87e-08,2;DOID:4305,9.87e-08,2;DOID:4468,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003100!5.57e-09!41;UBERON:0000992!9.67e-09!13;UBERON:0002384!1.37e-08!375;UBERON:0002119!3.36e-08!4;UBERON:0004531!3.36e-08!4;UBERON:0001474!1.29e-07!86;UBERON:0002371!2.14e-07!80;UBERON:0003134!3.94e-07!37;UBERON:0000474!3.94e-07!37;UBERON:0002405!5.63e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;1.18e-13;4!UBERON:0002046;4.33e-11;5!UBERON:0000992;2.83e-09;13!UBERON:0003134;4.27e-09;33!UBERON:0000474;4.66e-08;37!UBERON:0003513;6.08e-08;7!UBERON:0001281;1.93e-07;2!UBERON:0003497;1.93e-07;2!UBERON:0003909;1.93e-07;2!UBERON:0003835;1.93e-07;2!UBERON:0002456;1.93e-07;2!UBERON:0003100;7.96e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,1.18e-13,4;UBERON:0002046,4.55e-11,5;UBERON:0004117,4.55e-11,5;UBERON:0007689,4.55e-11,5;UBERON:0007123,4.55e-11,5;UBERON:0003091,4.55e-11,5;UBERON:0000992,2.96e-09,13;UBERON:0003134,2.03e-08,37;UBERON:0000474,2.03e-08,37;UBERON:0003513,6.52e-08,7;UBERON:0003100,1.38e-07,41;UBERON:0001281,1.87e-07,2;UBERON:0003497,1.87e-07,2;UBERON:0003909,1.87e-07,2;UBERON:0003835,1.87e-07,2;UBERON:0002456,2.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0.822335776043652,1.85823822537062,0.575384784644301,0,0,0.344745680736619,0.645484683583826,0,0.752969358170419,0,0.674170453335254,0,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0.868755378820466,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5903320840314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.8902214204205,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47305718976163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,11.6948809162537,15.3710327307497,0,0.265841714557995,1.04349012362347,0.300515217994437,0,0,0.909243296012797,1.07410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,62.3268662293877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52017555398455,2.48165108531456,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13050538903166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:127762515..127762539,- | |||
}} |
Latest revision as of 06:37, 24 July 2015
Short description: | p@chr12:127762515..127762539, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127762515..127762539, - |
Coexpression cluster: | C684_pagetoid_mesothelioma_placenta_bone_papillotubular_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.42e-13 | 1 |
plasma cell | 1.42e-13 | 1 |
plasmablast | 1.42e-13 | 1 |
epithelial cell of uterus | 2.45e-09 | 6 |
stromal cell of endometrium | 2.45e-09 | 6 |
bone matrix secreting cell | 9.87e-08 | 2 |
osteocyte | 9.87e-08 | 2 |
osteoclast | 9.87e-08 | 2 |
endothelial cell of sinusoid | 1.87e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.87e-07 | 2 |
mature B cell | 1.99e-07 | 2 |
pre-B-II cell | 1.99e-07 | 2 |
transitional stage B cell | 1.99e-07 | 2 |
small pre-B-II cell | 1.99e-07 | 2 |
immature B cell | 1.99e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
left ovary | 1.18e-13 | 4 |
thyroid gland | 4.55e-11 | 5 |
pharyngeal pouch | 4.55e-11 | 5 |
thyroid diverticulum | 4.55e-11 | 5 |
pharyngeal pouch 2 | 4.55e-11 | 5 |
thyroid primordium | 4.55e-11 | 5 |
female gonad | 2.96e-09 | 13 |
female reproductive organ | 2.03e-08 | 37 |
female reproductive system | 2.03e-08 | 37 |
trunk blood vessel | 6.52e-08 | 7 |
female organism | 1.38e-07 | 41 |
hepatic sinusoid | 1.87e-07 | 2 |
abdomen blood vessel | 1.87e-07 | 2 |
sinusoid | 1.87e-07 | 2 |
abdominal segment blood vessel | 1.87e-07 | 2 |
internal thoracic artery | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 5.86e-22 | 27 |
reproductive organ cancer | 2.06e-20 | 29 |
ovarian cancer | 1.94e-14 | 14 |
organ system benign neoplasm | 3.50e-14 | 1 |
skin benign neoplasm | 3.50e-14 | 1 |
integumentary system benign neoplasm | 3.50e-14 | 1 |
dermis tumor | 3.50e-14 | 1 |
cutaneous fibrous histiocytoma | 3.50e-14 | 1 |
female reproductive endometrioid cancer | 2.45e-09 | 6 |
giant cell tumor | 9.87e-08 | 2 |
bone giant cell tumor | 9.87e-08 | 2 |
clear cell adenocarcinoma | 1.64e-07 | 2 |