FFCP PHASE1:Hg19::chr12:21572132..21572142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:21572132..21572142,+ | |||
|description=CAGE_peak_at_chr12:21572132..21572142,+ | |||
|id=chr12:21572132..21572142,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.06e-22!7;CL:0000586!5.06e-22!7;CL:0002178!4.11e-10!3;CL:0002322!7.86e-10!5;CL:0000066!1.44e-09!254;CL:0000223!1.61e-08!59;CL:1000415!1.33e-07!2;CL:0002076!9.19e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.06e-21;7!CL:0000586;3.06e-21;7!CL:0002553;6.72e-11;1!CL:0000167;2.38e-10;1!CL:0000164;2.38e-10;1!CL:0000502;2.38e-10;1!CL:0000172;2.38e-10;1!CL:0000319;2.38e-10;1!CL:0000173;2.38e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.49e-21,7;CL:0000586,2.49e-21,7;CL:0002553,6.73e-11,1;CL:0000319,1.19e-10,1;CL:0000167,3.29e-10,1;CL:0000164,3.29e-10,1;CL:0000502,3.29e-10,1;CL:0000172,3.29e-10,1;CL:0000173,3.29e-10,1;CL:0002351,3.29e-10,1;CL:0000066,1.40e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.00e-15;10!UBERON:0005564;6.00e-15;10!CL:0002351;2.38e-10;1 | |||
|ontology_enrichment_disease=DOID:305!4.37e-23!106;DOID:0050687!2.33e-21!143;DOID:162!1.07e-19!235;DOID:14566!4.77e-19!239;DOID:3095!1.80e-10!22;DOID:2994!1.80e-10!22;DOID:3119!2.34e-10!14;DOID:0050686!9.47e-10!137;DOID:299!4.63e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.67e-14;22!DOID:2994;1.67e-14;22!DOID:3030;2.38e-10;1!DOID:4430;2.38e-10;1!DOID:305;4.00e-09;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.06e-17,106;DOID:3095,1.41e-14,22;DOID:2994,1.41e-14,22;DOID:0050687,1.15e-13,143;DOID:3030,1.19e-10,1;DOID:4430,3.29e-10,1;DOID:162,2.31e-08,235;DOID:14566,3.95e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.47e-10!8;UBERON:0002075!3.76e-10!18;UBERON:0005409!4.04e-10!35;UBERON:0002323!5.41e-09!46;UBERON:0004458!2.89e-08!49;UBERON:0001264!5.82e-08!10;UBERON:0003922!5.82e-08!10;UBERON:0003923!5.82e-08!10;UBERON:0003924!5.82e-08!10;UBERON:0003921!5.82e-08!10;UBERON:0003135!2.11e-07!11;UBERON:0001045!3.35e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.27e-18;8!UBERON:0003135;1.31e-13;11!UBERON:0003101;2.73e-10;22!UBERON:0000079;2.73e-10;22!UBERON:0002323;1.29e-08;45!UBERON:0000991;3.32e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.06e-18,8;UBERON:0003135,1.15e-13,11;UBERON:0003101,2.82e-10,22;UBERON:0000079,2.82e-10,22;UBERON:0002323,5.26e-09,46;UBERON:0004458,2.08e-08,49;UBERON:0003886,1.47e-07,54;UBERON:0000991,3.11e-07,21;UBERON:0009196,3.11e-07,21;UBERON:0009117,3.11e-07,21;UBERON:0005564,3.11e-07,21;UBERON:0004176,6.56e-07,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63626239701352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0.716084698702437,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0,0,0,1.13082457147153,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,1.32930774541437,0.992975867626496,1.56966459203613,0,2.56148591426813,0.138674673013139,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0.586654148204409,1.28254112402454,0,0.39961921916426,1.44090417154106,0,0.514784993585894,0,0,0,0.951329442515298,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76656284657122,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0.196300467230486,0,0,0,0,0,0,1.19370465096821,0.237840181555137,2.71070596893504,0,0,0,0,0,0,1.17838273550813,0,0,0,0,0,0,0.0999411559249289,1.60698544745092,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,1.63898357945543,0,1.63182127587171,2.6721740526556,2.84874188558019,1.25353769646188,0.0757786982182394,0,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:21572132..21572142,+ | |||
}} | }} |
Latest revision as of 07:29, 24 July 2015
Short description: | p@chr12:21572132..21572142, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:21572132..21572142, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.49e-21 | 7 |
germ cell | 2.49e-21 | 7 |
lung fibroblast | 6.73e-11 | 1 |
mucus secreting cell | 1.19e-10 | 1 |
peptide hormone secreting cell | 3.29e-10 | 1 |
enteroendocrine cell | 3.29e-10 | 1 |
type D enteroendocrine cell | 3.29e-10 | 1 |
somatostatin secreting cell | 3.29e-10 | 1 |
pancreatic D cell | 3.29e-10 | 1 |
progenitor cell of endocrine pancreas | 3.29e-10 | 1 |
epithelial cell | 1.40e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
testis | 1.06e-18 | 8 |
male reproductive organ | 1.15e-13 | 11 |
male organism | 2.82e-10 | 22 |
male reproductive system | 2.82e-10 | 22 |
body cavity | 5.26e-09 | 46 |
body cavity or lining | 2.08e-08 | 49 |
body cavity precursor | 1.47e-07 | 54 |
gonad | 3.11e-07 | 21 |
indifferent external genitalia | 3.11e-07 | 21 |
indifferent gonad | 3.11e-07 | 21 |
gonad primordium | 3.11e-07 | 21 |
external genitalia | 6.56e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.06e-17 | 106 |
germ cell and embryonal cancer | 1.41e-14 | 22 |
germ cell cancer | 1.41e-14 | 22 |
cell type cancer | 1.15e-13 | 143 |
mucinous adenocarcinoma | 1.19e-10 | 1 |
somatostatinoma | 3.29e-10 | 1 |
cancer | 2.31e-08 | 235 |
disease of cellular proliferation | 3.95e-08 | 239 |