FFCP PHASE1:Hg19::chr12:24972785..24972806,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:24972785..24972806,+ | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_at_chr12:24972785..24972806,+ | |||
|id=chr12:24972785..24972806,+ | |||
|ontology_enrichment_celltype=CL:0000785!3.77e-18!2;CL:0000955!3.77e-18!2;CL:0000818!3.77e-18!2;CL:0000954!3.77e-18!2;CL:0000816!3.77e-18!2;CL:0000945!6.83e-13!24;CL:0000826!6.83e-13!24;CL:0000817!2.00e-12!3;CL:0000819!5.79e-10!1;CL:0000946!6.33e-10!1;CL:0000786!6.33e-10!1;CL:0000980!6.33e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.81e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.81e-17,24;CL:0000826,4.81e-17,24;CL:0000838,4.22e-08,52;CL:0000542,5.90e-08,53;CL:0000051,5.90e-08,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;5.93e-26;1 | |||
|ontology_enrichment_disease=DOID:4960!1.65e-10!1;DOID:0070004!1.65e-10!1;DOID:630!2.59e-10!1;DOID:0050177!2.59e-10!1;DOID:0050427!2.59e-10!1;DOID:0060073!5.79e-10!1;DOID:8675!5.79e-10!1;DOID:0060058!1.37e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;2.16e-26;1!DOID:0070004;2.16e-26;1!DOID:630;7.62e-26;1!DOID:0050177;7.62e-26;1!DOID:0050427;7.62e-26;1!DOID:0060058;5.41e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.16e-26,1;DOID:0070004,2.16e-26,1;DOID:630,7.62e-26,1;DOID:0050177,7.62e-26,1;DOID:0050427,7.62e-26,1;DOID:0060058,5.41e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.73e-30!7;UBERON:0002106!1.03e-26!3;UBERON:0004854!1.03e-26!3;UBERON:0009034!1.03e-26!3;UBERON:0002095!1.03e-26!3;UBERON:0004782!1.03e-26!3;UBERON:0003281!1.03e-26!3;UBERON:0009664!1.03e-26!3;UBERON:0002296!1.03e-26!3;UBERON:0005602!1.03e-26!3;UBERON:0001179!1.03e-26!3;UBERON:0006293!1.03e-26!3;UBERON:0005057!1.63e-11!26;UBERON:0000945!2.16e-10!8;UBERON:0010039!2.16e-10!8;UBERON:0001154!2.37e-10!1;UBERON:0001153!2.37e-10!1;UBERON:0002372!2.84e-10!1;UBERON:0001961!2.84e-10!1;UBERON:0001744!2.84e-10!1;UBERON:0001735!2.84e-10!1;UBERON:0000029!4.06e-10!1;UBERON:0001736!4.44e-10!1;UBERON:0006298!4.44e-10!1;UBERON:0002370!2.34e-09!4;UBERON:0005058!2.34e-09!4;UBERON:0009113!2.34e-09!4;UBERON:0003295!2.34e-09!4;UBERON:0005562!2.34e-09!4;UBERON:0001042!2.79e-08!10;UBERON:0009145!2.79e-08!10;UBERON:0003408!3.17e-08!10;UBERON:0000974!3.25e-08!10;UBERON:0006562!1.43e-07!11;UBERON:0004457!4.36e-07!12;UBERON:0000042!4.36e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;5.93e-26;1!UBERON:0001153;5.93e-26;1!UBERON:0009854;5.93e-26;1!UBERON:0002372;9.79e-26;1!UBERON:0001961;9.79e-26;1!UBERON:0001744;9.79e-26;1!UBERON:0001042;9.79e-26;1!UBERON:0001735;9.79e-26;1!UBERON:0006562;1.37e-13;2!UBERON:0002106;1.19e-09;3!UBERON:0002405;5.58e-09;27!UBERON:0009856;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.93e-26,1;UBERON:0001153,5.93e-26,1;UBERON:0001045,5.93e-26,1;UBERON:0002372,9.79e-26,1;UBERON:0001961,9.79e-26,1;UBERON:0001744,9.79e-26,1;UBERON:0001735,9.79e-26,1;UBERON:0002106,1.19e-09,3;UBERON:0004854,1.19e-09,3;UBERON:0009034,1.19e-09,3;UBERON:0002095,1.19e-09,3;UBERON:0004782,1.19e-09,3;UBERON:0003281,1.19e-09,3;UBERON:0009664,1.19e-09,3;UBERON:0002296,1.19e-09,3;UBERON:0005602,1.19e-09,3;UBERON:0001179,1.19e-09,3;UBERON:0006293,1.19e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52567831062295,0,0,13.0469893788734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,1.58089305518355,70.6397070609196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,192.880777220114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.939839179798536,0.0644578879735772,29.482640997854,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,2.62673006756891,0,0,0,0,0,0,0,0,0,0,0.402547587182052,4.48795889224526 | |||
|short_description=p@chr12:24972785..24972806,+ | |||
}} |
Latest revision as of 07:41, 24 July 2015
Short description: | p@chr12:24972785..24972806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24972785..24972806, + |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.81e-17 | 24 |
pro-B cell | 4.81e-17 | 24 |
lymphoid lineage restricted progenitor cell | 4.22e-08 | 52 |
lymphocyte | 5.90e-08 | 53 |
common lymphoid progenitor | 5.90e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.93e-26 | 1 |
caecum | 5.93e-26 | 1 |
midgut | 5.93e-26 | 1 |
tonsil | 9.79e-26 | 1 |
mucosa-associated lymphoid tissue | 9.79e-26 | 1 |
lymphoid tissue | 9.79e-26 | 1 |
tonsillar ring | 9.79e-26 | 1 |
spleen | 1.19e-09 | 3 |
gastrointestinal system mesentery | 1.19e-09 | 3 |
stomach region | 1.19e-09 | 3 |
mesentery | 1.19e-09 | 3 |
gastrointestinal system serosa | 1.19e-09 | 3 |
mesentery of stomach | 1.19e-09 | 3 |
gut mesentery | 1.19e-09 | 3 |
dorsal mesentery | 1.19e-09 | 3 |
dorsal mesogastrium | 1.19e-09 | 3 |
peritoneal cavity | 1.19e-09 | 3 |
spleen primordium | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.16e-26 | 1 |
myeloma | 2.16e-26 | 1 |
genetic disease | 7.62e-26 | 1 |
monogenic disease | 7.62e-26 | 1 |
xeroderma pigmentosum | 7.62e-26 | 1 |
lymphoma | 5.41e-11 | 10 |